Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV30A0A087WSZ9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 KRT17P3-201ENST00000420566 1262 ntBASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 UNC93B5-201ENST00000530315 699 ntBASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 AC098934.4-201ENST00000564127 592 ntBASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 AC092666.2-201ENST00000613287 246 ntBASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV30A0A087WSZ9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 CROCCP3-202ENST00000420820 1947 ntBASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 NBPF21P-201ENST00000425093 1451 ntBASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 AL160286.2-201ENST00000567150 934 ntBASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 Z98044.1-201ENST00000632503 1764 ntBASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV30A0A087WSZ9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms