Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC2.04□□□□□ -2.08
LCE4AQ5TA78 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE4AQ5TA78 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC2.04□□□□□ -2.08
LCE4AQ5TA78 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE4AQ5TA78 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 PALB2-201ENST00000261584 4003 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC011504.1-201ENST00000623331 4103 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 SELENOWP1-201ENST00000322792 252 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 SNORD16-201ENST00000362803 99 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 RNU1-134P-201ENST00000362935 165 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 RNU6-249P-201ENST00000363016 102 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 RNU1-91P-201ENST00000364746 163 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 RNA5SP189-201ENST00000364920 115 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 SNORA56-201ENST00000383966 129 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AL359511.1-201ENST00000402970 211 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC245096.1-201ENST00000413104 546 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 BMS1P17-202ENST00000416720 316 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 SALL1P1-201ENST00000438101 3837 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 RN7SL382P-201ENST00000482631 282 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC146944.3-201ENST00000509969 371 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC090958.1-201ENST00000511122 351 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 RNU6-1089P-201ENST00000516473 104 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 RNA5SP434-201ENST00000516647 121 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 MIR514B-201ENST00000516774 80 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 SNORA4-201ENST00000584302 138 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC005786.1-201ENST00000588553 154 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC008133.2-201ENST00000624540 351 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 U6.100-201ENST00000636230 99 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 U6.103-201ENST00000637085 61 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC009093.8-201ENST00000641769 292 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC034111.1-201ENST00000562143 3770 ntBASIC2.03□□□□□ -2.08
LCE4AQ5TA78 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC2.03□□□□□ -2.08
LCE4AQ5TA78 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC2.03□□□□□ -2.09
LCE4AQ5TA78 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC2.03□□□□□ -2.09
LCE4AQ5TA78 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LCE4AQ5TA78 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC2.03□□□□□ -2.09
LCE4AQ5TA78 HLF-210ENST00000575345 3589 ntTSL 2 BASIC2.03□□□□□ -2.09
LCE4AQ5TA78 AC140134.1-201ENST00000511830 3544 ntBASIC2.03□□□□□ -2.09
LCE4AQ5TA78 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
LCE4AQ5TA78 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LCE4AQ5TA78 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
LCE4AQ5TA78 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC2.03□□□□□ -2.09
LCE4AQ5TA78 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
LCE4AQ5TA78 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE4AQ5TA78 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE4AQ5TA78 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LCE4AQ5TA78 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC2.02□□□□□ -2.09
LCE4AQ5TA78 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC2.02□□□□□ -2.09
LCE4AQ5TA78 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
LCE4AQ5TA78 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE4AQ5TA78 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE4AQ5TA78 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE4AQ5TA78 EXOC1-203ENST00000381295 3551 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms