Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCAF1Q9H7N4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCAF1Q9H7N4 Y_RNA.96-201ENST00000363092 109 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 SNORA37-201ENST00000384504 129 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 AL133475.1-201ENST00000404414 305 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 FTLP19-201ENST00000433300 394 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 HMGN2P9-201ENST00000476875 229 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 RPS29P20-201ENST00000489592 171 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 RNU4-60P-201ENST00000517239 135 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 SALL4P2-201ENST00000423288 2910 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 RNU6-887P-201ENST00000410660 100 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 RNU4-69P-201ENST00000410677 143 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 AC063976.3-201ENST00000426849 329 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 TMEM183AP1-205ENST00000432739 290 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 RPL19P16-201ENST00000433839 588 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 RPS4XP11-201ENST00000446897 772 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 HMGN2P10-201ENST00000448085 265 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 Y_RNA.705-201ENST00000516862 110 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 AC005005.4-201ENST00000623789 16698 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 OR51H2P-202ENST00000641424 3046 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 RNU6-117P-201ENST00000365415 107 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 RNU6-616P-201ENST00000384353 107 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 AC007161.1-204ENST00000423039 460 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 snoU13.22-201ENST00000459428 104 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 MIR4429-201ENST00000580105 73 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 MIR5197-201ENST00000583721 112 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 SNORD24-201ENST00000383884 75 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 RNU6-733P-201ENST00000410759 104 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 EIF4A1P3-201ENST00000411521 244 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 SNORA84-201ENST00000459229 133 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 RNU7-57P-201ENST00000459540 60 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 SDAD1P1-202ENST00000524156 2051 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 RNU6-509P-201ENST00000363519 107 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 MIR548A2-201ENST00000384956 97 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 MIR605-201ENST00000385078 83 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 RN7SKP156-201ENST00000410308 342 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 RBMY2UP-201ENST00000453474 324 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 AC021739.1-201ENST00000559631 174 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 MIR4712-201ENST00000583750 82 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 Y_RNA.467-201ENST00000384297 102 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 Y_RNA.545-201ENST00000384652 105 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 MIR600-201ENST00000385007 98 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 MIR105-1-201ENST00000385222 81 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 AC008155.2-201ENST00000464337 397 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 AL161713.1-201ENST00000555538 145 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 MIR4691-201ENST00000583764 85 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 MIR1255B1-201ENST00000636325 63 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms