Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCAF1Q9H7N4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCAF1Q9H7N4 Y_RNA.96-201ENST00000363092 109 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 SNORA37-201ENST00000384504 129 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 AL133475.1-201ENST00000404414 305 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 FTLP19-201ENST00000433300 394 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 HMGN2P9-201ENST00000476875 229 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 RPS29P20-201ENST00000489592 171 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 RNU4-60P-201ENST00000517239 135 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 SALL4P2-201ENST00000423288 2910 ntBASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
SCAF1Q9H7N4 RNU6-887P-201ENST00000410660 100 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 RNU4-69P-201ENST00000410677 143 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 AC063976.3-201ENST00000426849 329 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 TMEM183AP1-205ENST00000432739 290 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 RPL19P16-201ENST00000433839 588 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 RPS4XP11-201ENST00000446897 772 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 HMGN2P10-201ENST00000448085 265 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 Y_RNA.705-201ENST00000516862 110 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 AC005005.4-201ENST00000623789 16698 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 OR51H2P-202ENST00000641424 3046 ntBASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC7.56□□□□□ -1.2
SCAF1Q9H7N4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 RNU6-117P-201ENST00000365415 107 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 RNU6-616P-201ENST00000384353 107 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 AC007161.1-204ENST00000423039 460 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 snoU13.22-201ENST00000459428 104 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 MIR4429-201ENST00000580105 73 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 MIR5197-201ENST00000583721 112 ntBASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SCAF1Q9H7N4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 SNORD24-201ENST00000383884 75 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 RNU6-733P-201ENST00000410759 104 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 EIF4A1P3-201ENST00000411521 244 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 SNORA84-201ENST00000459229 133 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 RNU7-57P-201ENST00000459540 60 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 SDAD1P1-202ENST00000524156 2051 ntBASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.54□□□□□ -1.2
SCAF1Q9H7N4 RNU6-509P-201ENST00000363519 107 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 MIR548A2-201ENST00000384956 97 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 MIR605-201ENST00000385078 83 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 RN7SKP156-201ENST00000410308 342 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 RBMY2UP-201ENST00000453474 324 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 AC021739.1-201ENST00000559631 174 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 MIR4712-201ENST00000583750 82 ntBASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAF1Q9H7N4 Y_RNA.467-201ENST00000384297 102 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 Y_RNA.545-201ENST00000384652 105 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 MIR600-201ENST00000385007 98 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 MIR105-1-201ENST00000385222 81 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 AC008155.2-201ENST00000464337 397 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 AL161713.1-201ENST00000555538 145 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 MIR4691-201ENST00000583764 85 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 MIR1255B1-201ENST00000636325 63 ntBASIC7.52□□□□□ -1.2
SCAF1Q9H7N4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms