Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-9Q9BYQ8 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-9Q9BYQ8 UG0898H09-202ENST00000623646 7040 ntBASIC2.12□□□□□ -2.07
KRTAP4-9Q9BYQ8 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-9Q9BYQ8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-9Q9BYQ8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-9Q9BYQ8 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-9Q9BYQ8 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-9Q9BYQ8 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 MFSD8-233ENST00000641482 4860 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC009948.5-201ENST00000624360 4406 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 LRRC37A16P-202ENST00000586022 3725 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 RNU6-1260P-201ENST00000362944 107 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 SNORD1B-201ENST00000363091 84 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 Y_RNA.537-201ENST00000384626 109 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 MIR223-201ENST00000385204 110 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 MIR519A1-201ENST00000385257 85 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 RNA5SP474-201ENST00000391234 90 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 RN7SKP213-201ENST00000410746 298 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 RN7SL172P-201ENST00000460535 303 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 RN7SL193P-201ENST00000491708 276 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC008897.1-201ENST00000494006 347 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 SNORA31.26-201ENST00000517250 137 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 SNORA40.17-201ENST00000517256 115 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 CYP3A52P-201ENST00000563326 91 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC040162.2-201ENST00000573092 157 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 MIR4646-201ENST00000580775 63 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AL121932.1-201ENST00000605542 214 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC025574.2-201ENST00000615621 514 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC245014.3-201ENST00000618589 347 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC104581.5-201ENST00000624171 7141 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AL596244.1-201ENST00000567068 3779 ntBASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-9Q9BYQ8 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-9Q9BYQ8 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms