| CRY2 | Q49AN0 | U4atac.1-201 | ENST00000618345 | 95 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC099654.12-201 | ENST00000639868 | 649 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | PYGO1-201 | ENST00000302000 | 8488 nt | TSL 1 (best) BASIC | 2.45 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | MAPK10-266 | ENST00000641066 | 6555 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | ATP13A3-201 | ENST00000256031 | 7322 nt | APPRIS P1 TSL 5 BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-1106P-201 | ENST00000390845 | 107 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC083867.1-201 | ENST00000413567 | 457 nt | TSL 3 BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | MAMDC2-AS1-203 | ENST00000420573 | 339 nt | TSL 3 BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AL136369.2-201 | ENST00000420825 | 537 nt | TSL 3 BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC027124.2-201 | ENST00000428249 | 105 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC108667.1-201 | ENST00000428618 | 249 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC007969.2-201 | ENST00000441891 | 191 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RN7SKP210-201 | ENST00000459176 | 261 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | LINC02046-202 | ENST00000481334 | 390 nt | TSL 3 BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AK3P2-201 | ENST00000507976 | 429 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | LINC02276-201 | ENST00000508388 | 138 nt | TSL 3 BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-1038P-201 | ENST00000516516 | 104 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-506P-201 | ENST00000516553 | 94 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC004486.1-201 | ENST00000546846 | 233 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC093249.1-201 | ENST00000567049 | 203 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | MIR3683-201 | ENST00000580847 | 82 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | MIR4424-201 | ENST00000585257 | 86 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC012557.2-201 | ENST00000605919 | 418 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC010297.1-201 | ENST00000623948 | 149 nt | BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | ZBTB6-201 | ENST00000373659 | 4106 nt | APPRIS P1 TSL 1 (best) BASIC | 2.44 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | ASPM-202 | ENST00000367408 | 3747 nt | TSL 1 (best) BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AKAP9-203 | ENST00000359028 | 12247 nt | APPRIS ALT2 TSL 5 BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-428P-201 | ENST00000362942 | 107 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU1-52P-201 | ENST00000384190 | 164 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | MIR561-201 | ENST00000385216 | 97 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | LINC01807-201 | ENST00000432481 | 676 nt | TSL 3 BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AL136369.1-201 | ENST00000437825 | 244 nt | TSL 5 BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC091153.2-202 | ENST00000441700 | 384 nt | TSL 3 BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC018816.1-203 | ENST00000441894 | 338 nt | TSL 3 BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC009238.1-201 | ENST00000442165 | 424 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC009237.6-201 | ENST00000446969 | 424 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | SNRPGP7-201 | ENST00000469016 | 106 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | CCDC34P1-201 | ENST00000507441 | 517 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | SMAD1-AS2-201 | ENST00000508936 | 1090 nt | TSL 1 (best) BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-189P-201 | ENST00000516120 | 101 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU1-104P-201 | ENST00000517280 | 175 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | LINC01495-202 | ENST00000534135 | 343 nt | TSL 2 BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC092746.1-201 | ENST00000542819 | 562 nt | TSL 4 BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC090115.3-201 | ENST00000553218 | 849 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC009558.1-201 | ENST00000561174 | 581 nt | TSL 4 BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | VN1R80P-201 | ENST00000597126 | 338 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC092747.3-201 | ENST00000603769 | 301 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | MYSM1-208 | ENST00000622766 | 6020 nt | TSL 1 (best) BASIC | 2.43 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | SAMD9L-201 | ENST00000318238 | 7134 nt | APPRIS P1 TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNA5SP393-201 | ENST00000363423 | 117 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-82P-201 | ENST00000363970 | 107 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-827P-201 | ENST00000365553 | 106 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-1222P-201 | ENST00000384615 | 107 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC073626.1-201 | ENST00000415146 | 582 nt | TSL 4 BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AIMP1P2-201 | ENST00000425294 | 312 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | USP9YP8-201 | ENST00000441913 | 500 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | TRAPPC2P3-201 | ENST00000443200 | 321 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | MCHR2-AS1-203 | ENST00000451220 | 429 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AL121594.1-201 | ENST00000475906 | 575 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC012312.1-201 | ENST00000503710 | 527 nt | TSL 2 BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC091885.1-201 | ENST00000506658 | 268 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | LNX1-AS1-202 | ENST00000510785 | 550 nt | TSL 2 BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | CSN1S2AP-204 | ENST00000512167 | 671 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-1281P-201 | ENST00000516223 | 105 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | SNORA31.15-201 | ENST00000516771 | 132 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | CENPUP1-201 | ENST00000526649 | 1202 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | GNAI2P1-201 | ENST00000541815 | 315 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AL139193.1-201 | ENST00000554967 | 539 nt | TSL 4 BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | HMGB1P33-201 | ENST00000563485 | 527 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC025165.5-201 | ENST00000602802 | 578 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC009487.4-201 | ENST00000624969 | 3585 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-336P-201 | ENST00000364891 | 107 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | Y_RNA.372-201 | ENST00000365599 | 102 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | TSACC-205 | ENST00000368255 | 751 nt | APPRIS P1 TSL 1 (best) BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-38P-201 | ENST00000384085 | 107 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | MIR524-201 | ENST00000385242 | 87 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | TRAV40-201 | ENST00000390467 | 317 nt | APPRIS P1 BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | CD3D-202 | ENST00000392884 | 476 nt | TSL 2 BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | CBX3P9-201 | ENST00000402326 | 552 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AL590002.1-201 | ENST00000406554 | 418 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNA5SP181-201 | ENST00000410246 | 98 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | POLHP1-201 | ENST00000411806 | 470 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC009411.1-202 | ENST00000412424 | 548 nt | TSL 4 BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | ARL5AP1-201 | ENST00000418991 | 388 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | SEPT14P3-201 | ENST00000439401 | 183 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AL732372.2-207 | ENST00000445840 | 183 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | SEPT14P2-201 | ENST00000453405 | 183 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-333P-201 | ENST00000459117 | 107 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | snoU13.14-201 | ENST00000459372 | 104 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC104435.1-201 | ENST00000483483 | 166 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC019235.1-201 | ENST00000503847 | 207 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | SEPT14P4-201 | ENST00000513445 | 186 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | SNORA14.1-201 | ENST00000516113 | 141 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | Y_RNA.704-201 | ENST00000516851 | 102 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | RNU6-835P-201 | ENST00000516974 | 104 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC083973.1-205 | ENST00000518994 | 601 nt | TSL 2 BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | IGHVIII-5-1-201 | ENST00000523059 | 99 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | FO082796.1-201 | ENST00000523795 | 183 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC115990.1-201 | ENST00000526957 | 301 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| CRY2 | Q49AN0 | AC068205.1-204 | ENST00000532989 | 481 nt | TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |