Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 AC006026.1-201ENST00000444025 1803 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.11-201ENST00000362375 109 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RNU1-35P-201ENST00000362782 153 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.67-201ENST00000362870 100 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RNU6-78P-201ENST00000362897 107 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.813-201ENST00000364639 102 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RNU1-100P-201ENST00000365255 165 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.387-201ENST00000383918 102 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RNU2-49P-201ENST00000410666 184 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 AL591806.2-201ENST00000433122 173 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 AC244505.4-201ENST00000434905 287 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 AL513043.1-201ENST00000439124 535 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 AC009296.1-201ENST00000443146 155 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 SSXP5-201ENST00000443473 287 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 UBE2V1P7-201ENST00000446395 340 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RNU7-187P-201ENST00000458985 68 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.632-201ENST00000459189 102 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 AC107626.1-201ENST00000471084 183 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RN7SL283P-201ENST00000489055 303 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RN7SKP43-201ENST00000516173 320 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 RNU6-548P-201ENST00000517083 115 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 AP004607.1-201ENST00000524456 203 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 ZNF861P-201ENST00000588126 639 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 U4.7-201ENST00000638126 106 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 MTND5P19-201ENST00000424872 1794 ntBASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HDAC9Q9UKV0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 AC092593.1-201ENST00000515413 1815 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 RNU5E-7P-201ENST00000365290 117 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 RNU6-827P-201ENST00000365553 106 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 MIR592-201ENST00000384959 97 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 AC092427.1-202ENST00000430569 476 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 AL603825.1-201ENST00000438481 80 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 RPS15AP7-201ENST00000439294 405 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 AL031274.1-201ENST00000450334 232 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 RN7SKP40-201ENST00000517211 242 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 AC006199.1-201ENST00000548728 219 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 TRAV32-201ENST00000553993 340 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 FRG2DP-202ENST00000566967 323 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 AC103810.1-201ENST00000579873 453 ntBASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HDAC9Q9UKV0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 AC008264.2-201ENST00000610193 3731 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 SNORD62.1-201ENST00000362541 86 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.384-201ENST00000383909 102 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 RPS3P1-201ENST00000456781 192 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 MTCYBP40-201ENST00000509390 1135 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 RNU6-559P-201ENST00000516151 98 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 SNORA43.2-201ENST00000516652 128 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 AC109479.2-201ENST00000517842 174 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 MIR3616-201ENST00000584070 92 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 AC078899.3-201ENST00000599065 212 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 AL050343.2-201ENST00000607338 280 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 AL161423.1-201ENST00000613700 262 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 AC098657.3-201ENST00000620434 263 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 MIR3199-2-201ENST00000636243 86 ntBASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HDAC9Q9UKV0 AC108206.1-201ENST00000570186 4159 ntBASIC3.27□□□□□ -1.89
HDAC9Q9UKV0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HDAC9Q9UKV0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.27□□□□□ -1.89
HDAC9Q9UKV0 MIR26A1-201ENST00000362205 77 ntBASIC3.27□□□□□ -1.89
HDAC9Q9UKV0 RNU6-428P-201ENST00000362942 107 ntBASIC3.27□□□□□ -1.89
HDAC9Q9UKV0 SET-203ENST00000372688 801 ntTSL 2 BASIC3.27□□□□□ -1.89
HDAC9Q9UKV0 Y_RNA.482-201ENST00000384377 111 ntBASIC3.27□□□□□ -1.89
HDAC9Q9UKV0 SNORD116-29-201ENST00000384516 83 ntBASIC3.27□□□□□ -1.89
HDAC9Q9UKV0 RPL21P75-201ENST00000396599 483 ntBASIC3.27□□□□□ -1.89
HDAC9Q9UKV0 RPL21P28-201ENST00000401418 483 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms