Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC3.36□□□□□ -1.87
KRTAP3-3Q9BYR6 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 HNRNPA1P54-201ENST00000411857 9714 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 USP3-201ENST00000268049 5311 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU6-461P-201ENST00000364195 107 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 SNORA55-201ENST00000364587 135 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 RNA5SP167-201ENST00000365461 116 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU6-1072P-201ENST00000384703 107 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU6-443P-201ENST00000384780 107 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 MIR561-201ENST00000385216 97 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 RNA5SP38-201ENST00000410750 119 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 AL732292.1-201ENST00000426692 226 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 RPLP0P1-201ENST00000457002 361 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 AC090602.1-201ENST00000469695 252 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SL685P-201ENST00000476271 298 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 IGLVV-66-201ENST00000523818 341 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 AC004232.1-201ENST00000571388 208 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 MIR4491-201ENST00000581087 68 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 AC068234.2-201ENST00000619646 522 ntBASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KRTAP3-3Q9BYR6 JPX-212ENST00000639185 9658 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AL359955.1-201ENST00000455242 3275 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 LRRC37A16P-202ENST00000586022 3725 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 SNORA51.7-201ENST00000384171 134 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU6-1031P-201ENST00000384773 107 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 MIR218-1-201ENST00000384999 110 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 MIR563-201ENST00000385080 79 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 RNA5SP252-201ENST00000391131 119 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 SNORD75.2-201ENST00000408784 58 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SKP177-201ENST00000410567 355 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AC092066.1-201ENST00000425131 317 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 CYP4F34P-201ENST00000425951 481 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 RPS29P12-201ENST00000460178 152 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SL213P-201ENST00000463482 317 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AC008620.1-201ENST00000468453 592 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AC079944.1-201ENST00000485426 495 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 SNORA58-201ENST00000505219 137 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 RNU6-531P-201ENST00000516694 104 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SKP260-201ENST00000516907 149 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AL031846.1-201ENST00000560933 314 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 MIR3935-201ENST00000583472 104 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 SIGLEC31P-201ENST00000594237 551 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 RN7SL126P-201ENST00000616400 299 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 AP005212.3-201ENST00000619964 528 ntBASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
KRTAP3-3Q9BYR6 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.34□□□□□ -1.88
KRTAP3-3Q9BYR6 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC3.34□□□□□ -1.88
KRTAP3-3Q9BYR6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.34□□□□□ -1.88
KRTAP3-3Q9BYR6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC3.34□□□□□ -1.88
KRTAP3-3Q9BYR6 AC104623.2-202ENST00000623477 4002 ntBASIC3.34□□□□□ -1.88
KRTAP3-3Q9BYR6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 AP001273.1-201ENST00000624493 3152 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms