Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC018630.3-201ENST00000542637 96 ntBASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 MIR4724-201ENST00000579485 89 ntBASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 RPL30P11-203ENST00000598995 310 ntBASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTC1Q2NKJ3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 RNU6-1285P-201ENST00000363480 105 ntBASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 RNU1-140P-201ENST00000365040 165 ntBASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 RNU4-43P-201ENST00000410628 137 ntBASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 RNU6-1245P-201ENST00000411130 106 ntBASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 RNU7-141P-201ENST00000459304 62 ntBASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 Y_RNA.690-201ENST00000516603 95 ntBASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 SNORA31.20-201ENST00000517111 133 ntBASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 TRAV8-5-201ENST00000537369 341 ntBASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CTC1Q2NKJ3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 AC018529.3-201ENST00000624212 2254 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 AC092268.1-201ENST00000342691 405 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 MIR372-201ENST00000362225 67 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 MIR383-201ENST00000362257 73 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 MIR367-201ENST00000362299 68 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 Y_RNA.220-201ENST00000364244 109 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 RNU6-454P-201ENST00000364292 107 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 Y_RNA.245-201ENST00000364493 95 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 RNA5SP283-201ENST00000365604 119 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 RNU6-1124P-201ENST00000384169 107 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 RNU6-793P-201ENST00000384233 104 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 MIR1302-5-201ENST00000408164 150 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 RNU6-628P-201ENST00000410675 107 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 RNU6-383P-201ENST00000410864 94 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 RPS20P14-201ENST00000412545 360 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 RN7SL132P-201ENST00000478131 296 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 SCARNA15.2-201ENST00000516409 127 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 RNA5SP54-201ENST00000516951 92 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 AC016256.1-201ENST00000547971 354 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 MIR378D2-201ENST00000580636 98 ntBASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTC1Q2NKJ3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 MIR208A-201ENST00000362287 71 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 RNU5F-3P-201ENST00000363767 117 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 SNORD45.3-201ENST00000363836 72 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 RNU6-335P-201ENST00000364563 113 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 RNU6-1181P-201ENST00000384191 106 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 SNORA72-201ENST00000384339 132 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 SNORD12C-201ENST00000386307 89 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 RPL23AP95-201ENST00000426806 265 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 AP000705.1-201ENST00000454567 350 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 RPS20P22-201ENST00000473700 357 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 AL132838.2-201ENST00000492041 314 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 AC093331.1-201ENST00000521474 169 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 MIR5571-201ENST00000577998 113 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 MIR8059-201ENST00000620427 81 ntBASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms