Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC024067.1-201ENST00000426199 223 ntBASIC4.23□□□□□ -1.73
BMP3P12645 AL078601.1-201ENST00000444542 271 ntBASIC4.23□□□□□ -1.73
BMP3P12645 PRSS3P4-201ENST00000453323 162 ntBASIC4.23□□□□□ -1.73
BMP3P12645 BTF3L4P4-201ENST00000506381 449 ntBASIC4.23□□□□□ -1.73
BMP3P12645 RNA5SP290-201ENST00000517133 127 ntBASIC4.23□□□□□ -1.73
BMP3P12645 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.23□□□□□ -1.73
BMP3P12645 AC005296.1-201ENST00000616145 209 ntBASIC4.23□□□□□ -1.73
BMP3P12645 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.23□□□□□ -1.73
BMP3P12645 U6.105-201ENST00000637379 88 ntBASIC4.23□□□□□ -1.73
BMP3P12645 AC018555.1-201ENST00000567548 1980 ntBASIC4.23□□□□□ -1.73
BMP3P12645 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BMP3P12645 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.23□□□□□ -1.73
BMP3P12645 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BMP3P12645 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.22□□□□□ -1.73
BMP3P12645 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
BMP3P12645 RNA5SP205-201ENST00000364653 136 ntBASIC4.22□□□□□ -1.73
BMP3P12645 RNU4-56P-201ENST00000364700 142 ntBASIC4.22□□□□□ -1.73
BMP3P12645 Y_RNA.353-201ENST00000365440 108 ntBASIC4.22□□□□□ -1.73
BMP3P12645 RNU6-281P-201ENST00000384212 103 ntBASIC4.22□□□□□ -1.73
BMP3P12645 RNU6-72P-201ENST00000384285 79 ntBASIC4.22□□□□□ -1.73
BMP3P12645 Y_RNA.571-201ENST00000384753 98 ntBASIC4.22□□□□□ -1.73
BMP3P12645 MIR10B-201ENST00000385011 110 ntBASIC4.22□□□□□ -1.73
BMP3P12645 MIR329-1-201ENST00000385028 80 ntBASIC4.22□□□□□ -1.73
BMP3P12645 RNU6-426P-201ENST00000516464 97 ntBASIC4.22□□□□□ -1.73
BMP3P12645 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.22□□□□□ -1.73
BMP3P12645 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.22□□□□□ -1.73
BMP3P12645 AC006001.4-201ENST00000622243 395 ntBASIC4.22□□□□□ -1.73
BMP3P12645 AC241585.2-209ENST00000638217 143 ntBASIC4.22□□□□□ -1.73
BMP3P12645 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.22□□□□□ -1.73
BMP3P12645 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
BMP3P12645 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
BMP3P12645 AC100821.1-201ENST00000523153 2479 ntBASIC4.22□□□□□ -1.73
BMP3P12645 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
BMP3P12645 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.22□□□□□ -1.73
BMP3P12645 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.22□□□□□ -1.73
BMP3P12645 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BMP3P12645 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BMP3P12645 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BMP3P12645 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BMP3P12645 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
BMP3P12645 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
BMP3P12645 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
BMP3P12645 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.21□□□□□ -1.74
BMP3P12645 DEFB108F-201ENST00000344638 222 ntBASIC4.21□□□□□ -1.74
BMP3P12645 Y_RNA.331-201ENST00000365267 102 ntBASIC4.21□□□□□ -1.74
BMP3P12645 RNU6-257P-201ENST00000410238 98 ntBASIC4.21□□□□□ -1.74
BMP3P12645 RNU6-1001P-201ENST00000411265 100 ntBASIC4.21□□□□□ -1.74
BMP3P12645 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.21□□□□□ -1.74
BMP3P12645 AC008267.6-201ENST00000441664 139 ntBASIC4.21□□□□□ -1.74
BMP3P12645 IFNA11P-201ENST00000446352 526 ntBASIC4.21□□□□□ -1.74
BMP3P12645 ANP32BP2-201ENST00000454525 545 ntBASIC4.21□□□□□ -1.74
BMP3P12645 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.21□□□□□ -1.74
BMP3P12645 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.21□□□□□ -1.74
BMP3P12645 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.21□□□□□ -1.74
BMP3P12645 HMGB3P3-201ENST00000510526 400 ntBASIC4.21□□□□□ -1.74
BMP3P12645 SNORD116-25-201ENST00000516517 92 ntBASIC4.21□□□□□ -1.74
BMP3P12645 SNORA70.18-201ENST00000516696 98 ntBASIC4.21□□□□□ -1.74
BMP3P12645 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.21□□□□□ -1.74
BMP3P12645 AL391261.3-201ENST00000557194 520 ntBASIC4.21□□□□□ -1.74
BMP3P12645 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.21□□□□□ -1.74
BMP3P12645 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.21□□□□□ -1.74
BMP3P12645 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.21□□□□□ -1.74
BMP3P12645 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.21□□□□□ -1.74
BMP3P12645 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.21□□□□□ -1.74
BMP3P12645 AL365440.1-201ENST00000436135 2167 ntBASIC4.21□□□□□ -1.74
BMP3P12645 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.21□□□□□ -1.74
BMP3P12645 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BMP3P12645 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
BMP3P12645 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
BMP3P12645 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
BMP3P12645 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BMP3P12645 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BMP3P12645 RNU6-525P-201ENST00000363685 104 ntBASIC4.2□□□□□ -1.74
BMP3P12645 RNU6-818P-201ENST00000364837 108 ntBASIC4.2□□□□□ -1.74
BMP3P12645 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BMP3P12645 RNU6-741P-201ENST00000383889 107 ntBASIC4.2□□□□□ -1.74
BMP3P12645 RNU6-211P-201ENST00000384047 107 ntBASIC4.2□□□□□ -1.74
BMP3P12645 RNU6-1145P-201ENST00000384246 107 ntBASIC4.2□□□□□ -1.74
BMP3P12645 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
BMP3P12645 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.2□□□□□ -1.74
BMP3P12645 EIF1AXP1-201ENST00000419267 435 ntBASIC4.2□□□□□ -1.74
BMP3P12645 WARS2P1-201ENST00000429678 537 ntBASIC4.2□□□□□ -1.74
BMP3P12645 NDUFB1P1-201ENST00000435191 180 ntBASIC4.2□□□□□ -1.74
BMP3P12645 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.2□□□□□ -1.74
BMP3P12645 RNU6-1256P-201ENST00000516539 103 ntBASIC4.2□□□□□ -1.74
BMP3P12645 RN7SKP209-201ENST00000516888 304 ntBASIC4.2□□□□□ -1.74
BMP3P12645 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.2□□□□□ -1.74
BMP3P12645 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.2□□□□□ -1.74
BMP3P12645 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.2□□□□□ -1.74
BMP3P12645 SNORD84-203ENST00000584275 78 ntBASIC4.2□□□□□ -1.74
BMP3P12645 AL133393.1-201ENST00000603277 287 ntBASIC4.2□□□□□ -1.74
BMP3P12645 snoU18.1-201ENST00000629629 71 ntBASIC4.2□□□□□ -1.74
BMP3P12645 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
BMP3P12645 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BMP3P12645 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.2□□□□□ -1.74
BMP3P12645 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.2□□□□□ -1.74
BMP3P12645 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BMP3P12645 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BMP3P12645 AL353743.1-202ENST00000431724 1695 ntBASIC4.19□□□□□ -1.74
BMP3P12645 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms