Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL031003.1-201ENST00000404229 172 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 YPEL5P1-201ENST00000419731 367 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 AL161651.1-201ENST00000440882 223 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 AC108022.1-201ENST00000493466 478 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 RNU6-919P-201ENST00000516731 104 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 AC105129.1-201ENST00000560250 297 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 AC140113.4-201ENST00000622087 222 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 AC073308.1-201ENST00000623696 305 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 MIR3658-201ENST00000636291 56 ntBASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PCDHB11Q9Y5F2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 AC125257.1-201ENST00000560400 2930 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 RNA5SP479-201ENST00000364858 117 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 MIR539-201ENST00000365690 78 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 SNORA72.4-201ENST00000384174 132 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 AL355497.1-201ENST00000406262 551 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 RNU6-710P-201ENST00000410424 105 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 RNU6-344P-201ENST00000516635 111 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 RN7SKP289-201ENST00000517244 295 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 AC109810.1-201ENST00000534066 224 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 AC105137.2-201ENST00000569073 466 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 AC015912.2-201ENST00000571053 181 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 MIR1254-2-201ENST00000579553 63 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 AC005086.4-201ENST00000623065 213 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 AC004944.1-201ENST00000517807 3059 ntBASIC4.47□□□□□ -1.69
PCDHB11Q9Y5F2 AC134026.1-201ENST00000623249 2239 ntBASIC4.46□□□□□ -1.69
PCDHB11Q9Y5F2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 RNU4-10P-201ENST00000364383 140 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 RNA5SP509-201ENST00000364577 119 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 Y_RNA.293-201ENST00000364908 93 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6-44P-201ENST00000384045 107 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 SNORA1.3-201ENST00000384676 136 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 RNA5SP201-201ENST00000410316 124 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 AC011998.1-201ENST00000433403 117 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 SCARNA10-201ENST00000459255 330 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 RN7SKP21-201ENST00000516503 220 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 MIR2116-201ENST00000517221 80 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 AP001781.1-201ENST00000530977 207 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 HIGD1AP1-201ENST00000550979 275 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 MIR3939-201ENST00000582614 106 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 SNORD11B-201ENST00000607707 90 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 Y_RNA.802-201ENST00000614892 130 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 AC092435.4-201ENST00000623012 4159 ntBASIC4.46□□□□□ -1.7
PCDHB11Q9Y5F2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 Y_RNA.337-201ENST00000365312 102 ntBASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 SNORA20-201ENST00000384662 132 ntBASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 SNORA57.1-201ENST00000391227 145 ntBASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 SDHCP2-201ENST00000398565 501 ntBASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 Z74021.1-201ENST00000423610 407 ntBASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 RPEP3-201ENST00000425462 676 ntBASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 AC027176.1-201ENST00000560204 514 ntBASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 PCGEM1.1-201ENST00000613431 131 ntBASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 AL110115.1-201ENST00000614396 364 ntBASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB11Q9Y5F2 AF127577.6-201ENST00000623352 2191 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms