Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNA5SP515-201ENST00000364570 118 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 SNORA20B-201ENST00000384220 132 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 SNORA48.7-201ENST00000391302 135 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 RPL36AP10-201ENST00000421785 322 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 IFNWP4-201ENST00000453148 294 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 RNU2-60P-201ENST00000517290 128 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 AC004832.5-201ENST00000608677 401 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 AL121890.5-201ENST00000620848 304 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 AC126323.6-202ENST00000568092 3511 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 AC138915.1-201ENST00000565427 1685 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 NOL8P1-201ENST00000508336 3529 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 Y_RNA.120-201ENST00000363304 110 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 SNORA79-201ENST00000408376 140 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 AC004975.1-201ENST00000428733 208 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 AL353748.1-201ENST00000440753 474 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 RN7SL604P-201ENST00000492589 296 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 RNU6-1282P-201ENST00000516735 96 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 MTND6P33-201ENST00000571794 183 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 RN7SL435P-201ENST00000584418 282 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 AL031274.2-201ENST00000599419 203 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 SNRPGP15-201ENST00000600149 222 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 AC068724.3-201ENST00000625906 87 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 AL022322.2-201ENST00000624072 20397 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 DHX9P1-201ENST00000436565 3076 ntBASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SCUBE3Q8IX30 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 AL356489.2-201ENST00000566968 3528 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 U8.1-201ENST00000362843 134 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 RNU6-1181P-201ENST00000384191 106 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 RNU6-383P-201ENST00000410864 94 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 AC093331.1-201ENST00000521474 169 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 MIR3923-201ENST00000579521 83 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 AC090897.2-201ENST00000581715 130 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 MIR3136-201ENST00000583498 78 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 U3.53-201ENST00000628922 216 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 MIR6830-201ENST00000636015 70 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 AC139713.2-214ENST00000642059 1811 ntBASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCUBE3Q8IX30 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 RNU6-1164P-201ENST00000364428 107 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 RNU6-880P-201ENST00000384526 107 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 SNORA48.5-201ENST00000391143 135 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 Z98745.1-201ENST00000402553 494 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 Y_RNA.622-201ENST00000411091 108 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 TOMM22P1-201ENST00000418578 312 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 SCARNA10-201ENST00000459255 330 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 RPL7AP28-201ENST00000464513 571 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 RNU6-344P-201ENST00000516635 111 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 AL451007.1-201ENST00000595491 289 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 SNORD11B-201ENST00000607707 90 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 AC015813.4-201ENST00000610469 179 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 AC106754.2-201ENST00000623006 233 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 SNORD98-201ENST00000636377 67 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 ZNF137P-201ENST00000456718 1920 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 Z82209.1-201ENST00000422141 2135 ntBASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCUBE3Q8IX30 AL592437.2-201ENST00000421655 2434 ntBASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.86□□□□□ -1.63
SCUBE3Q8IX30 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms