RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 AEBP2Q6ZN18 517 aaPredicted RBP14.65□□□□□ -0.06
RNU6-880P-201ENST00000384526 CHIC1Q5VXU3 224 aa13.59□□□□□ -0.23
RNU6-880P-201ENST00000384526 SENP3Q9H4L4 574 aaPredicted RBP12.51□□□□□ -0.41
RNU6-880P-201ENST00000384526 PHF23Q9BUL5 403 aaPredicted RBP12.27□□□□□ -0.45
RNU6-880P-201ENST00000384526 FOXD1Q16676 465 aa11.75□□□□□ -0.53
RNU6-880P-201ENST00000384526 POTEDQ86YR6 584 aa11.75□□□□□ -0.53
RNU6-880P-201ENST00000384526 MSH5O43196 834 aa11.14□□□□□ -0.63
RNU6-880P-201ENST00000384526 PIAS4Q8N2W9 510 aaPredicted RBP10.84□□□□□ -0.67
RNU6-880P-201ENST00000384526 PPP6R1Q9UPN7 881 aa10.62□□□□□ -0.71
RNU6-880P-201ENST00000384526 ADRA2BP18089 450 aa10.54□□□□□ -0.72
RNU6-880P-201ENST00000384526 PLPPR3Q6T4P5 718 aa10.43□□□□□ -0.74
RNU6-880P-201ENST00000384526 DMRT2Q9Y5R5 561 aa9.87□□□□□ -0.83
RNU6-880P-201ENST00000384526 CACNB1Q02641 598 aaPredicted RBP9.85□□□□□ -0.83
RNU6-880P-201ENST00000384526 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
RNU6-880P-201ENST00000384526 SCAF1Q9H7N4 1312 aaKnown RBP9.55□□□□□ -0.88
RNU6-880P-201ENST00000384526 RNF39Q9H2S5 420 aa9.5□□□□□ -0.89
RNU6-880P-201ENST00000384526 DCAF8L1A6NGE4 600 aa9.43□□□□□ -0.9
RNU6-880P-201ENST00000384526 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
RNU6-880P-201ENST00000384526 C1QBPQ07021 282 aaKnown RBP9.29□□□□□ -0.92
RNU6-880P-201ENST00000384526 PPP4R3CPQ6ZMV5 832 aa9.1□□□□□ -0.95
RNU6-880P-201ENST00000384526 POTEHQ6S545 545 aa9.09□□□□□ -0.95
RNU6-880P-201ENST00000384526 RNF216Q9NWF9 866 aaPredicted RBP9.08□□□□□ -0.96
RNU6-880P-201ENST00000384526 DNAJC5BQ9UF47 199 aa9.05□□□□□ -0.96
RNU6-880P-201ENST00000384526 CNKSR2Q8WXI2 1034 aa9.02□□□□□ -0.97
RNU6-880P-201ENST00000384526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.82□□□□□ -1
RNU6-880P-201ENST00000384526 DSG3P32926 999 aa8.72□□□□□ -1.01
RNU6-880P-201ENST00000384526 SPINK5Q9NQ38 1064 aaPredicted RBP8.67□□□□□ -1.02
RNU6-880P-201ENST00000384526 U3KPZ7 1027 aaPredicted RBP8.65□□□□□ -1.02
RNU6-880P-201ENST00000384526 CAPN15O75808 1086 aa8.62□□□□□ -1.03
RNU6-880P-201ENST00000384526 NCBP3Q53F19 620 aaKnown RBP8.54□□□□□ -1.04
RNU6-880P-201ENST00000384526 NPM3O75607 178 aaKnown RBP8.5□□□□□ -1.05
RNU6-880P-201ENST00000384526 ABCB7O75027 752 aa8.41□□□□□ -1.06
RNU6-880P-201ENST00000384526 TRHP20396 242 aaPredicted RBP8.36□□□□□ -1.07
RNU6-880P-201ENST00000384526 CHRDL2Q6WN34 429 aa8.34□□□□□ -1.07
RNU6-880P-201ENST00000384526 ZNF219Q9P2Y4 722 aaPredicted RBP8.33□□□□□ -1.08
RNU6-880P-201ENST00000384526 SP7Q8TDD2 431 aaPredicted RBP8.29□□□□□ -1.08
RNU6-880P-201ENST00000384526 RBM42Q9BTD8 480 aaKnown RBP8.29□□□□□ -1.08
RNU6-880P-201ENST00000384526 SLC4A2P04920 1241 aa8.27□□□□□ -1.09
RNU6-880P-201ENST00000384526 APLP2Q06481 763 aa8.24□□□□□ -1.09
RNU6-880P-201ENST00000384526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.13□□□□□ -1.11
RNU6-880P-201ENST00000384526 HNRNPUL2Q1KMD3 747 aaKnown RBP8.13□□□□□ -1.11
RNU6-880P-201ENST00000384526 SAMD1Q6SPF0 538 aaPredicted RBP8.09□□□□□ -1.11
RNU6-880P-201ENST00000384526 PIP4P2Q8N4L2 257 aa8.05□□□□□ -1.12
RNU6-880P-201ENST00000384526 POLA2Q14181 598 aa8.02□□□□□ -1.13
RNU6-880P-201ENST00000384526 AKT1S1Q96B36 256 aa8.01□□□□□ -1.13
RNU6-880P-201ENST00000384526 HAX1O00165 279 aa7.98□□□□□ -1.13
RNU6-880P-201ENST00000384526 REM2Q8IYK8 340 aaPredicted RBP7.95□□□□□ -1.14
RNU6-880P-201ENST00000384526 KCNA4P22459 653 aa7.92□□□□□ -1.14
RNU6-880P-201ENST00000384526 EVX2Q03828 476 aa7.92□□□□□ -1.14
RNU6-880P-201ENST00000384526 FXR2P51116 673 aaKnown RBP eCLIP7.91□□□□□ -1.14
RNU6-880P-201ENST00000384526 PITPNM1O00562 1244 aa7.9□□□□□ -1.14
RNU6-880P-201ENST00000384526 MYCNP04198 464 aaPredicted RBP7.86□□□□□ -1.15
RNU6-880P-201ENST00000384526 OSCARQ8IYS5 282 aa7.85□□□□□ -1.15
RNU6-880P-201ENST00000384526 ZBTB12Q9Y330 459 aaPredicted RBP7.81□□□□□ -1.16
RNU6-880P-201ENST00000384526 LHX8Q68G74 356 aa7.75□□□□□ -1.17
RNU6-880P-201ENST00000384526 ATF5Q9Y2D1 282 aaPredicted RBP7.75□□□□□ -1.17
RNU6-880P-201ENST00000384526 C19orf67A6NJJ6 358 aa7.68□□□□□ -1.18
RNU6-880P-201ENST00000384526 GABBR2O75899 941 aa7.66□□□□□ -1.18
RNU6-880P-201ENST00000384526 PLSCR2Q9NRY7 297 aa7.66□□□□□ -1.18
RNU6-880P-201ENST00000384526 PRKAR2AP13861 404 aaKnown RBP7.65□□□□□ -1.18
RNU6-880P-201ENST00000384526 SPDYE2BA6NHP3 402 aa7.56□□□□□ -1.2
RNU6-880P-201ENST00000384526 SPDYE6P0CI01 402 aa7.56□□□□□ -1.2
RNU6-880P-201ENST00000384526 SPDYE2Q495Y8 402 aa7.56□□□□□ -1.2
RNU6-880P-201ENST00000384526 POTEIP0CG38 1075 aa7.55□□□□□ -1.2
RNU6-880P-201ENST00000384526 SPDYE1Q8NFV5 336 aaPredicted RBP7.53□□□□□ -1.2
RNU6-880P-201ENST00000384526 CLEC11AQ9Y240 323 aa7.53□□□□□ -1.2
RNU6-880P-201ENST00000384526 FOXD4L1Q9NU39 408 aa7.51□□□□□ -1.21
RNU6-880P-201ENST00000384526 CHADLQ6NUI6 762 aa7.48□□□□□ -1.21
RNU6-880P-201ENST00000384526 SSUH2Q9Y2M2 353 aa7.44□□□□□ -1.22
RNU6-880P-201ENST00000384526 FBLN2P98095 1184 aa7.4□□□□□ -1.22
RNU6-880P-201ENST00000384526 CD44P16070 742 aaKnown RBP7.39□□□□□ -1.23
RNU6-880P-201ENST00000384526 MKRN4PQ13434 485 aaPredicted RBP7.38□□□□□ -1.23
RNU6-880P-201ENST00000384526 ZNF692Q9BU19 519 aaPredicted RBP7.35□□□□□ -1.23
RNU6-880P-201ENST00000384526 POTEMA6NI47 508 aa7.34□□□□□ -1.23
RNU6-880P-201ENST00000384526 OTUD5Q96G74 571 aa7.34□□□□□ -1.23
RNU6-880P-201ENST00000384526 SLC4A1APQ9BWU0 796 aaKnown RBP7.33□□□□□ -1.24
RNU6-880P-201ENST00000384526 PRR29P0C7W0 189 aa7.32□□□□□ -1.24
RNU6-880P-201ENST00000384526 DCBLD2Q96PD2 775 aa7.32□□□□□ -1.24
RNU6-880P-201ENST00000384526 ZBTB22O15209 634 aa7.31□□□□□ -1.24
RNU6-880P-201ENST00000384526 CLCN6P51797 869 aa7.31□□□□□ -1.24
RNU6-880P-201ENST00000384526 ATXN8OSP0DMR3 200 aa7.3□□□□□ -1.24
RNU6-880P-201ENST00000384526 POTEGQ6S5H5 508 aa7.3□□□□□ -1.24
RNU6-880P-201ENST00000384526 FARP1Q9Y4F1 1045 aaPredicted RBP7.3□□□□□ -1.24
RNU6-880P-201ENST00000384526 POTEB2H3BUK9 544 aa7.29□□□□□ -1.24
RNU6-880P-201ENST00000384526 ZNF579Q8NAF0 562 aaKnown RBP7.28□□□□□ -1.24
RNU6-880P-201ENST00000384526 PABPN1Q86U42 306 aaKnown RBP eCLIP7.26□□□□□ -1.25
RNU6-880P-201ENST00000384526 GALR2O43603 387 aaPredicted RBP7.23□□□□□ -1.25
RNU6-880P-201ENST00000384526 ZRANB1Q9UGI0 708 aa7.19□□□□□ -1.26
RNU6-880P-201ENST00000384526 PCDH10Q9P2E7 1040 aa7.18□□□□□ -1.26
RNU6-880P-201ENST00000384526 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
RNU6-880P-201ENST00000384526 PELP1Q8IZL8 1130 aaKnown RBP7.14□□□□□ -1.27
RNU6-880P-201ENST00000384526 POTEJP0CG39 1038 aa7.12□□□□□ -1.27
RNU6-880P-201ENST00000384526 PHF12Q96QT6 1004 aa7.11□□□□□ -1.27
RNU6-880P-201ENST00000384526 CREBZFQ9NS37 354 aa7.09□□□□□ -1.27
RNU6-880P-201ENST00000384526 METRNQ9UJH8 293 aa7.07□□□□□ -1.28
RNU6-880P-201ENST00000384526 ASTLQ6HA08 431 aaPredicted RBP7.03□□□□□ -1.28
RNU6-880P-201ENST00000384526 FAM163AQ96GL9 167 aaPredicted RBP7.01□□□□□ -1.29
RNU6-880P-201ENST00000384526 ATMINO43313 823 aaPredicted RBP7□□□□□ -1.29
RNU6-880P-201ENST00000384526 MAMSTRQ6ZN01 415 aa7□□□□□ -1.29
RNU6-880P-201ENST00000384526 SLC39A7Q92504 469 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms