Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 Y_RNA.617-201ENST00000410920 90 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-592P-201ENST00000411333 103 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 RPS29P7-201ENST00000439662 171 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 AC109327.2-201ENST00000448339 378 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 SNORD108-201ENST00000459332 71 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 RNA5SP103-201ENST00000459503 118 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 RPL31P13-201ENST00000484151 370 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 PARP4P3-201ENST00000510265 317 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 RNU1-103P-201ENST00000516502 125 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 RPL23AP53-201ENST00000521854 457 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 MIR5688-201ENST00000580619 83 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 Z73965.1-201ENST00000623412 2297 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 Z82209.1-201ENST00000422141 2135 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 AC004944.1-201ENST00000517807 3059 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-942P-201ENST00000363002 107 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 RNA5SP513-201ENST00000364648 118 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 Y_RNA.287-201ENST00000364853 94 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-728P-201ENST00000365375 104 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-597P-201ENST00000365620 102 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-1310P-201ENST00000384153 107 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 MIRLET7F2-201ENST00000385277 83 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 AL606845.1-201ENST00000404881 255 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 RNU4-43P-201ENST00000410628 137 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 CYCSP49-201ENST00000420810 319 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 RPL39P29-201ENST00000447779 157 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 HMGB3P8-201ENST00000449709 577 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 snoU109.2-201ENST00000459316 135 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 AC139453.3-201ENST00000493276 369 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 HMGB1P22-201ENST00000505315 124 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 AP005432.2-201ENST00000608162 586 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 AC112484.5-201ENST00000624189 228 ntBASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3Q9BZ76 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AC004817.4-201ENST00000602396 3625 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AP000542.2-201ENST00000623199 6179 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-766P-201ENST00000362478 107 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 SNORD32A-201ENST00000364805 84 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 RNA5SP22-201ENST00000365393 109 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 RNA5SP366-201ENST00000365454 123 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 SNORA72.4-201ENST00000384174 132 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AL512604.1-201ENST00000404812 257 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 RPL23AP95-201ENST00000426806 265 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AL445584.1-201ENST00000431451 330 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AC112220.1-201ENST00000434628 355 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AC243964.1-201ENST00000441814 261 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 Y_RNA.649-201ENST00000459077 103 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 RN7SL810P-201ENST00000493031 276 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AC006199.1-201ENST00000548728 219 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AC006349.1-201ENST00000555526 235 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AC019176.2-201ENST00000611579 315 ntBASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
CNTNAP3Q9BZ76 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CNTNAP3Q9BZ76 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 AC138915.1-201ENST00000565427 1685 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms