Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RPL23AP52-201ENST00000439311 478 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 HMGB3P8-201ENST00000449709 577 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 AL591623.2-201ENST00000449978 222 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 AC245047.8-201ENST00000456455 284 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 RPS20P22-201ENST00000473700 357 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-572P-201ENST00000516724 80 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-762P-201ENST00000517107 102 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 RNU1-45P-201ENST00000517191 141 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 AC005255.1-201ENST00000593748 216 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 RNA5SP108-201ENST00000605921 117 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 SNX18P1Y-201ENST00000616231 511 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 AC012640.5-201ENST00000623897 319 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 AC112200.1-201ENST00000625015 234 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 AC099654.7-201ENST00000635788 2127 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.179-201ENST00000363844 90 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-1164P-201ENST00000364428 107 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.245-201ENST00000364493 95 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.348-201ENST00000365403 103 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-969P-201ENST00000383900 105 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 RNU4-43P-201ENST00000410628 137 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 RPL39P29-201ENST00000447779 157 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 SNORA43.2-201ENST00000516652 128 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 RNU4-60P-201ENST00000517239 135 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 MIR4458-201ENST00000578872 75 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 MIR4286-201ENST00000580651 93 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 AC099669.2-201ENST00000616549 437 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 AL121890.5-201ENST00000620848 304 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 MIR3674-201ENST00000636576 68 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-3Q8TAU0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
NKX2-3Q8TAU0 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.21□□□□□ -1.57
NKX2-3Q8TAU0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
NKX2-3Q8TAU0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.21□□□□□ -1.57
NKX2-3Q8TAU0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NKX2-3Q8TAU0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 MIR208A-201ENST00000362287 71 ntBASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 Y_RNA.333-201ENST00000365274 102 ntBASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-1245P-201ENST00000411130 106 ntBASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 ANP32BP2-201ENST00000454525 545 ntBASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 AC090142.3-201ENST00000519012 385 ntBASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 AC091178.1-203ENST00000584586 279 ntBASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 uc_338.28-201ENST00000612082 187 ntBASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-3Q8TAU0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 Z95331.1-201ENST00000623075 23112 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-640P-201ENST00000363693 105 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-1048P-201ENST00000364054 107 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 SNORA72.4-201ENST00000384174 132 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 MIR514A1-201ENST00000385133 98 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 U3.40-201ENST00000408706 208 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 RNA5SP475-201ENST00000410568 110 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 AL135790.2-201ENST00000437701 267 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 RPS4XP13-201ENST00000483219 789 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 AL132838.2-201ENST00000492041 314 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-1061P-201ENST00000516530 99 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 RNU2-12P-201ENST00000517216 168 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 AC006199.1-201ENST00000548728 219 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms