Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MIR8069-2-201ENST00000621412 86 ntBASIC4.95□□□□□ -1.62
USP46P62068 MIR7641-1-201ENST00000627518 61 ntBASIC4.95□□□□□ -1.62
USP46P62068 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP46P62068 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP46P62068 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP46P62068 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.95□□□□□ -1.62
USP46P62068 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP46P62068 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.94□□□□□ -1.62
USP46P62068 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP46P62068 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP46P62068 SNORD113.2-201ENST00000364166 89 ntBASIC4.94□□□□□ -1.62
USP46P62068 RNU1-64P-201ENST00000365443 163 ntBASIC4.94□□□□□ -1.62
USP46P62068 MIR616-201ENST00000385293 97 ntBASIC4.94□□□□□ -1.62
USP46P62068 CBX3P9-201ENST00000402326 552 ntBASIC4.94□□□□□ -1.62
USP46P62068 RNU6-710P-201ENST00000410424 105 ntBASIC4.94□□□□□ -1.62
USP46P62068 AC016397.1-201ENST00000412463 242 ntBASIC4.94□□□□□ -1.62
USP46P62068 PTGES3P4-201ENST00000426243 356 ntBASIC4.94□□□□□ -1.62
USP46P62068 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.94□□□□□ -1.62
USP46P62068 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.94□□□□□ -1.62
USP46P62068 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.94□□□□□ -1.62
USP46P62068 RPL21P126-201ENST00000470049 478 ntBASIC4.94□□□□□ -1.62
USP46P62068 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.94□□□□□ -1.62
USP46P62068 RNU6-928P-201ENST00000516876 104 ntBASIC4.94□□□□□ -1.62
USP46P62068 MIR3136-201ENST00000583498 78 ntBASIC4.94□□□□□ -1.62
USP46P62068 MIR378J-201ENST00000611988 109 ntBASIC4.94□□□□□ -1.62
USP46P62068 AL391261.4-201ENST00000616012 481 ntBASIC4.94□□□□□ -1.62
USP46P62068 MIR6810-201ENST00000622701 70 ntBASIC4.94□□□□□ -1.62
USP46P62068 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USP46P62068 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP46P62068 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.94□□□□□ -1.62
USP46P62068 MAPK10-263ENST00000641052 4307 ntBASIC4.93□□□□□ -1.62
USP46P62068 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.93□□□□□ -1.62
USP46P62068 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP46P62068 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP46P62068 AC002543.1-201ENST00000299783 1954 ntBASIC4.93□□□□□ -1.62
USP46P62068 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP46P62068 OR14L1P-202ENST00000641545 3009 ntBASIC4.93□□□□□ -1.62
USP46P62068 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP46P62068 SNORD115-30-201ENST00000364117 82 ntBASIC4.93□□□□□ -1.62
USP46P62068 RNU6-487P-201ENST00000365430 104 ntBASIC4.93□□□□□ -1.62
USP46P62068 RPEP3-201ENST00000425462 676 ntBASIC4.93□□□□□ -1.62
USP46P62068 RPL23AP1-201ENST00000428990 471 ntBASIC4.93□□□□□ -1.62
USP46P62068 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.93□□□□□ -1.62
USP46P62068 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.93□□□□□ -1.62
USP46P62068 RNU7-197P-201ENST00000458836 62 ntBASIC4.93□□□□□ -1.62
USP46P62068 RN7SL860P-201ENST00000473738 223 ntBASIC4.93□□□□□ -1.62
USP46P62068 RPL36AP41-201ENST00000493820 306 ntBASIC4.93□□□□□ -1.62
USP46P62068 RNU6-659P-201ENST00000516454 104 ntBASIC4.93□□□□□ -1.62
USP46P62068 RNU2-56P-201ENST00000516826 190 ntBASIC4.93□□□□□ -1.62
USP46P62068 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.93□□□□□ -1.62
USP46P62068 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.93□□□□□ -1.62
USP46P62068 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.93□□□□□ -1.62
USP46P62068 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP46P62068 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP46P62068 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP46P62068 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.92□□□□□ -1.62
USP46P62068 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP46P62068 RNU6-1205P-201ENST00000363625 106 ntBASIC4.92□□□□□ -1.62
USP46P62068 MIR15B-201ENST00000385045 98 ntBASIC4.92□□□□□ -1.62
USP46P62068 RNA5SP397-201ENST00000391323 118 ntBASIC4.92□□□□□ -1.62
USP46P62068 AL355497.1-201ENST00000406262 551 ntBASIC4.92□□□□□ -1.62
USP46P62068 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.92□□□□□ -1.62
USP46P62068 AL591419.1-201ENST00000427423 339 ntBASIC4.92□□□□□ -1.62
USP46P62068 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.92□□□□□ -1.62
USP46P62068 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.92□□□□□ -1.62
USP46P62068 RNA5SP249-201ENST00000516127 99 ntBASIC4.92□□□□□ -1.62
USP46P62068 RNU1-117P-201ENST00000517041 158 ntBASIC4.92□□□□□ -1.62
USP46P62068 AP001328.1-201ENST00000528550 176 ntBASIC4.92□□□□□ -1.62
USP46P62068 AC006199.1-201ENST00000548728 219 ntBASIC4.92□□□□□ -1.62
USP46P62068 CYCSP40-201ENST00000575927 294 ntBASIC4.92□□□□□ -1.62
USP46P62068 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.92□□□□□ -1.62
USP46P62068 AC018692.3-201ENST00000623929 123 ntBASIC4.92□□□□□ -1.62
USP46P62068 MIR6844-201ENST00000637122 62 ntBASIC4.92□□□□□ -1.62
USP46P62068 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
USP46P62068 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP46P62068 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP46P62068 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP46P62068 AC007496.3-201ENST00000624987 3443 ntBASIC4.92□□□□□ -1.62
USP46P62068 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP46P62068 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
USP46P62068 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP46P62068 RNU6-50P-201ENST00000362356 103 ntBASIC4.91□□□□□ -1.62
USP46P62068 RNU6-1180P-201ENST00000364935 107 ntBASIC4.91□□□□□ -1.62
USP46P62068 RNU6-643P-201ENST00000384018 107 ntBASIC4.91□□□□□ -1.62
USP46P62068 Y_RNA.521-201ENST00000384560 114 ntBASIC4.91□□□□□ -1.62
USP46P62068 MT-TT-201ENST00000387460 66 ntBASIC4.91□□□□□ -1.62
USP46P62068 RN7SKP267-201ENST00000410381 285 ntBASIC4.91□□□□□ -1.62
USP46P62068 RNU6-1064P-201ENST00000410626 104 ntBASIC4.91□□□□□ -1.62
USP46P62068 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.91□□□□□ -1.62
USP46P62068 snoU13.1-201ENST00000459157 104 ntBASIC4.91□□□□□ -1.62
USP46P62068 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.91□□□□□ -1.62
USP46P62068 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP46P62068 AC092991.1-201ENST00000477176 376 ntBASIC4.91□□□□□ -1.62
USP46P62068 AC108022.1-201ENST00000493466 478 ntBASIC4.91□□□□□ -1.62
USP46P62068 RAC1P5-201ENST00000512182 576 ntBASIC4.91□□□□□ -1.62
USP46P62068 RNU5F-2P-201ENST00000516066 82 ntBASIC4.91□□□□□ -1.62
USP46P62068 RNA5SP76-201ENST00000516277 87 ntBASIC4.91□□□□□ -1.62
USP46P62068 AC105137.2-201ENST00000569073 466 ntBASIC4.91□□□□□ -1.62
USP46P62068 MIR5096-201ENST00000583713 70 ntBASIC4.91□□□□□ -1.62
USP46P62068 MIR4715-201ENST00000584117 79 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms