Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 RNU6-436P-201ENST00000516171 114 ntBASIC5.54□□□□□ -1.52
NBPF3Q9H094 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.54□□□□□ -1.52
NBPF3Q9H094 MIR4512-201ENST00000583257 77 ntBASIC5.54□□□□□ -1.52
NBPF3Q9H094 AC004832.5-201ENST00000608677 401 ntBASIC5.54□□□□□ -1.52
NBPF3Q9H094 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.54□□□□□ -1.52
NBPF3Q9H094 AC024581.2-201ENST00000619986 252 ntBASIC5.54□□□□□ -1.52
NBPF3Q9H094 AC015726.2-201ENST00000620112 122 ntBASIC5.54□□□□□ -1.52
NBPF3Q9H094 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NBPF3Q9H094 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
NBPF3Q9H094 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NBPF3Q9H094 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.53□□□□□ -1.52
NBPF3Q9H094 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NBPF3Q9H094 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NBPF3Q9H094 Y_RNA.245-201ENST00000364493 95 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 SNORD32A-201ENST00000364805 84 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 RNU6-49P-201ENST00000384256 107 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 SNORA37-201ENST00000384504 129 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 MIR514A1-201ENST00000385133 98 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 AL606845.1-201ENST00000404881 255 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 RN7SKP53-201ENST00000411337 315 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 AL353748.1-201ENST00000440753 474 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 snoU13.6-201ENST00000458785 104 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 AC109327.1-201ENST00000471666 403 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 SNORA43.2-201ENST00000516652 128 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 AC090142.3-201ENST00000519012 385 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.53□□□□□ -1.52
NBPF3Q9H094 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.53□□□□□ -1.52
NBPF3Q9H094 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NBPF3Q9H094 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NBPF3Q9H094 CENPCP1-201ENST00000533085 2578 ntBASIC5.53□□□□□ -1.52
NBPF3Q9H094 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
NBPF3Q9H094 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NBPF3Q9H094 AC021146.4-201ENST00000309229 279 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 RNU1-83P-201ENST00000363426 164 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 RNU1-64P-201ENST00000365443 163 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 SNORA36A-201ENST00000384221 132 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 RNU6-19P-201ENST00000384718 107 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 MIR548A1-201ENST00000385041 97 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 EIF4A1P3-201ENST00000411521 244 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 AC074117.2-201ENST00000417130 397 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 Z82209.1-201ENST00000422141 2135 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.52□□□□□ -1.53
NBPF3Q9H094 AC008065.1-201ENST00000428525 348 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.52□□□□□ -1.53
NBPF3Q9H094 AC004386.2-201ENST00000441858 148 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 H2AFZP5-201ENST00000446960 382 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.52□□□□□ -1.53
NBPF3Q9H094 VN1R85P-201ENST00000601587 426 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 AC062037.1-201ENST00000605302 128 ntBASIC5.52□□□□□ -1.53
NBPF3Q9H094 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NBPF3Q9H094 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.52□□□□□ -1.53
NBPF3Q9H094 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
NBPF3Q9H094 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NBPF3Q9H094 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NBPF3Q9H094 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NBPF3Q9H094 Y_RNA.179-201ENST00000363844 90 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 AL512633.1-201ENST00000399931 655 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 U3.40-201ENST00000408706 208 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 RPL39P29-201ENST00000447779 157 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 SNRPGP7-201ENST00000469016 106 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 RNA5SP290-201ENST00000517133 127 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 AC016256.1-201ENST00000547971 354 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 AC107016.1-201ENST00000550463 337 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 MIR3939-201ENST00000582614 106 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 RN7SL435P-201ENST00000584418 282 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 AC027309.3-201ENST00000623419 351 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 MIR3674-201ENST00000636576 68 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 AC018529.3-201ENST00000624212 2254 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NBPF3Q9H094 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 AL136164.4-201ENST00000625013 2135 ntBASIC5.51□□□□□ -1.53
NBPF3Q9H094 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NBPF3Q9H094 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.51□□□□□ -1.53
NBPF3Q9H094 ASNSP1-201ENST00000518311 1939 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NBPF3Q9H094 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.5□□□□□ -1.53
NBPF3Q9H094 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.5□□□□□ -1.53
NBPF3Q9H094 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.5□□□□□ -1.53
NBPF3Q9H094 SNORD114-19-201ENST00000363072 75 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 Y_RNA.229-201ENST00000364347 113 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 SNORD58C-201ENST00000365223 64 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 RNU6-728P-201ENST00000365375 104 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 RNU6-1310P-201ENST00000384153 107 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 SNORA72.4-201ENST00000384174 132 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 RNU6-106P-201ENST00000384405 107 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 MIR134-201ENST00000385258 73 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 CYP4F29P-201ENST00000420685 446 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 RPL23AP95-201ENST00000426806 265 ntBASIC5.5□□□□□ -1.53
NBPF3Q9H094 SCARNA10-201ENST00000459255 330 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms