Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
THBS1P07996 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
THBS1P07996 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.39□□□□□ -1.71
THBS1P07996 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
THBS1P07996 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
THBS1P07996 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.39□□□□□ -1.71
THBS1P07996 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
THBS1P07996 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
THBS1P07996 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.38□□□□□ -1.71
THBS1P07996 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
THBS1P07996 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.38□□□□□ -1.71
THBS1P07996 RNU6-407P-201ENST00000365280 104 ntBASIC4.38□□□□□ -1.71
THBS1P07996 SNORA18.3-201ENST00000384122 132 ntBASIC4.38□□□□□ -1.71
THBS1P07996 RNU6-1181P-201ENST00000384191 106 ntBASIC4.38□□□□□ -1.71
THBS1P07996 SNORA36A-201ENST00000384221 132 ntBASIC4.38□□□□□ -1.71
THBS1P07996 AL590762.2-201ENST00000395798 571 ntBASIC4.38□□□□□ -1.71
THBS1P07996 AC244098.2-201ENST00000422068 99 ntBASIC4.38□□□□□ -1.71
THBS1P07996 HMGN2P30-201ENST00000423237 256 ntBASIC4.38□□□□□ -1.71
THBS1P07996 AC092047.1-201ENST00000424997 240 ntBASIC4.38□□□□□ -1.71
THBS1P07996 HMGB1P37-201ENST00000439613 609 ntBASIC4.38□□□□□ -1.71
THBS1P07996 AC112498.1-201ENST00000444401 332 ntBASIC4.38□□□□□ -1.71
THBS1P07996 RPS27P1-201ENST00000450552 247 ntBASIC4.38□□□□□ -1.71
THBS1P07996 AP000705.1-201ENST00000454567 350 ntBASIC4.38□□□□□ -1.71
THBS1P07996 AC010285.1-201ENST00000470580 392 ntBASIC4.38□□□□□ -1.71
THBS1P07996 AC006499.6-201ENST00000511169 607 ntBASIC4.38□□□□□ -1.71
THBS1P07996 RNU6-844P-201ENST00000517175 102 ntBASIC4.38□□□□□ -1.71
THBS1P07996 AC023043.3-201ENST00000593113 385 ntBASIC4.38□□□□□ -1.71
THBS1P07996 AC005255.1-201ENST00000593748 216 ntBASIC4.38□□□□□ -1.71
THBS1P07996 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
THBS1P07996 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
THBS1P07996 AC015813.6-201ENST00000624409 5808 ntBASIC4.38□□□□□ -1.71
THBS1P07996 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
THBS1P07996 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
THBS1P07996 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
THBS1P07996 AC025031.4-201ENST00000621248 3271 ntBASIC4.38□□□□□ -1.71
THBS1P07996 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.38□□□□□ -1.71
THBS1P07996 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
THBS1P07996 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
THBS1P07996 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.37□□□□□ -1.71
THBS1P07996 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
THBS1P07996 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.37□□□□□ -1.71
THBS1P07996 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.37□□□□□ -1.71
THBS1P07996 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
THBS1P07996 RNU6-335P-201ENST00000364563 113 ntBASIC4.37□□□□□ -1.71
THBS1P07996 RNU6-1180P-201ENST00000364935 107 ntBASIC4.37□□□□□ -1.71
THBS1P07996 RNU1-100P-201ENST00000365255 165 ntBASIC4.37□□□□□ -1.71
THBS1P07996 RNU6-728P-201ENST00000365375 104 ntBASIC4.37□□□□□ -1.71
THBS1P07996 SNORA22-201ENST00000383907 134 ntBASIC4.37□□□□□ -1.71
THBS1P07996 SNORA72.4-201ENST00000384174 132 ntBASIC4.37□□□□□ -1.71
THBS1P07996 MIR192-201ENST00000384915 110 ntBASIC4.37□□□□□ -1.71
THBS1P07996 MIR15B-201ENST00000385045 98 ntBASIC4.37□□□□□ -1.71
THBS1P07996 RNU6-1228P-201ENST00000391014 107 ntBASIC4.37□□□□□ -1.71
THBS1P07996 RNU6-460P-201ENST00000391158 108 ntBASIC4.37□□□□□ -1.71
THBS1P07996 MIR921-201ENST00000401133 56 ntBASIC4.37□□□□□ -1.71
THBS1P07996 YPEL5P1-201ENST00000419731 367 ntBASIC4.37□□□□□ -1.71
THBS1P07996 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.37□□□□□ -1.71
THBS1P07996 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.37□□□□□ -1.71
THBS1P07996 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.37□□□□□ -1.71
THBS1P07996 RNA5SP464-201ENST00000516251 108 ntBASIC4.37□□□□□ -1.71
THBS1P07996 IGKV1-32-201ENST00000519290 311 ntBASIC4.37□□□□□ -1.71
THBS1P07996 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.37□□□□□ -1.71
THBS1P07996 MTND5P34-201ENST00000568888 325 ntBASIC4.37□□□□□ -1.71
THBS1P07996 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.37□□□□□ -1.71
THBS1P07996 Y_RNA.757-201ENST00000578934 114 ntBASIC4.37□□□□□ -1.71
THBS1P07996 AL391813.1-201ENST00000603098 260 ntBASIC4.37□□□□□ -1.71
THBS1P07996 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
THBS1P07996 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
THBS1P07996 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
THBS1P07996 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
THBS1P07996 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
THBS1P07996 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.37□□□□□ -1.71
THBS1P07996 AC022336.2-201ENST00000568966 2538 ntBASIC4.37□□□□□ -1.71
THBS1P07996 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.37□□□□□ -1.71
THBS1P07996 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
THBS1P07996 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
THBS1P07996 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.37□□□□□ -1.71
THBS1P07996 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
THBS1P07996 AP001273.1-201ENST00000624493 3152 ntBASIC4.37□□□□□ -1.71
THBS1P07996 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.36□□□□□ -1.71
THBS1P07996 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
THBS1P07996 AC139713.2-215ENST00000641428 5037 ntBASIC4.36□□□□□ -1.71
THBS1P07996 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
THBS1P07996 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
THBS1P07996 OR14L1P-202ENST00000641545 3009 ntBASIC4.36□□□□□ -1.71
THBS1P07996 AL136164.3-201ENST00000624429 3978 ntBASIC4.36□□□□□ -1.71
THBS1P07996 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
THBS1P07996 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
THBS1P07996 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
THBS1P07996 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.36□□□□□ -1.71
THBS1P07996 RNU6-629P-201ENST00000384061 103 ntBASIC4.36□□□□□ -1.71
THBS1P07996 Y_RNA.521-201ENST00000384560 114 ntBASIC4.36□□□□□ -1.71
THBS1P07996 SNORA26.5-201ENST00000391215 123 ntBASIC4.36□□□□□ -1.71
THBS1P07996 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.36□□□□□ -1.71
THBS1P07996 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.36□□□□□ -1.71
THBS1P07996 HMGB3P8-201ENST00000449709 577 ntBASIC4.36□□□□□ -1.71
THBS1P07996 RNU7-107P-201ENST00000459121 61 ntBASIC4.36□□□□□ -1.71
THBS1P07996 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
THBS1P07996 SNORA70.16-201ENST00000516390 95 ntBASIC4.36□□□□□ -1.71
THBS1P07996 RN7SL52P-201ENST00000584271 284 ntBASIC4.36□□□□□ -1.71
THBS1P07996 FAM27B-201ENST00000610601 213 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms