Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC2Q9Y5Z7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC2Q9Y5Z7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC2Q9Y5Z7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC2Q9Y5Z7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC2Q9Y5Z7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 AL157384.1-201ENST00000445995 2473 ntBASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 MIR662-201ENST00000384847 95 ntBASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 TSPY22P-201ENST00000427496 604 ntBASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 MIR3917-201ENST00000580971 93 ntBASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 AL732292.2-201ENST00000609649 430 ntBASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 AL391807.1-203ENST00000604392 2365 ntBASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.86■□□□□ 0.77
HCFC2Q9Y5Z7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 TSPY19P-201ENST00000418461 509 ntBASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 TSPY18P-201ENST00000441642 509 ntBASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 TPSP2-201ENST00000561760 610 ntBASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC2Q9Y5Z7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 DRAXINP1-201ENST00000437611 948 ntBASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 EMBP1-201ENST00000458200 901 ntBASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 KRT8P3-201ENST00000519669 1449 ntBASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC2Q9Y5Z7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 LINC01006-201ENST00000333319 2292 ntBASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 AC009078.2-202ENST00000463353 338 ntBASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 RNF126P1-202ENST00000569893 925 ntBASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.83■□□□□ 0.77
HCFC2Q9Y5Z7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC2Q9Y5Z7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
HCFC2Q9Y5Z7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.83■□□□□ 0.76
HCFC2Q9Y5Z7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.83■□□□□ 0.76
HCFC2Q9Y5Z7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC2Q9Y5Z7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC2Q9Y5Z7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms