Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 AL023284.2-201ENST00000405850 579 ntBASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 AC113347.1-201ENST00000413321 391 ntBASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 AC010203.1-204ENST00000548782 407 ntBASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLDN16Q9Y5I7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 TERF1P1-201ENST00000311003 1181 ntBASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 RCN1P1-201ENST00000400413 996 ntBASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 HMGA1P5-201ENST00000412453 271 ntBASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN16Q9Y5I7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 AC005363.2-201ENST00000618631 242 ntBASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 AL138966.2-201ENST00000621997 464 ntBASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN16Q9Y5I7 KRT8P45-201ENST00000414328 1447 ntBASIC17.64■□□□□ 0.42
CLDN16Q9Y5I7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 AC005521.1-201ENST00000393351 872 ntBASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN16Q9Y5I7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms