Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 KRT17P3-201ENST00000420566 1262 ntBASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 AP003097.1-201ENST00000530657 1135 ntBASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 AC069544.1-201ENST00000609399 999 ntBASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA3Q9Y5H8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 HLA-L-209ENST00000420110 1011 ntBASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 AC026366.1-201ENST00000488803 879 ntBASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 AC233263.1-201ENST00000578059 224 ntBASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA3Q9Y5H8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHA3Q9Y5H8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms