Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA11Q9Y5H2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 AL445675.2-201ENST00000620291 557 ntBASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA11Q9Y5H2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 AL353807.1-201ENST00000427475 662 ntBASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 RPPH1-201ENST00000516869 333 ntBASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 AL353708.3-201ENST00000610272 989 ntBASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA11Q9Y5H2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 NIFKP9-201ENST00000419265 221 ntBASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 AP002982.1-201ENST00000492365 877 ntBASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 ITM2C-210ENST00000620962 501 ntBASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 AC131212.4-201ENST00000623606 975 ntBASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 CROCCP3-202ENST00000420820 1947 ntBASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 HTR7P1-201ENST00000538670 1336 ntBASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA11Q9Y5H2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGA11Q9Y5H2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGA11Q9Y5H2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PCDHGA11Q9Y5H2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGA11Q9Y5H2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 KRT18P29-201ENST00000397031 1267 ntBASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 KSR1P1-201ENST00000446298 240 ntBASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA11Q9Y5H2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms