Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 DGCR10-201ENST00000609839 495 ntBASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB6Q9Y5F9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB6Q9Y5F9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 AC093484.2-201ENST00000580996 2166 ntBASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 RCN1P1-201ENST00000400413 996 ntBASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 AP000525.1-201ENST00000608286 694 ntBASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PCDHGB6Q9Y5F9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 MIR1238-201ENST00000408483 83 ntBASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 NAPSB-206ENST00000562112 1266 ntBASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB6Q9Y5F9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms