Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 KRT8P11-201ENST00000409686 1436 ntBASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 CRYGFP-201ENST00000418459 633 ntBASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 AL358472.4-201ENST00000633140 710 ntBASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB9Q9Y5E1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 TSPY14P-201ENST00000303979 915 ntBASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 TSPY21P-201ENST00000433481 731 ntBASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 AC022616.7-201ENST00000525383 220 ntBASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB9Q9Y5E1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 TSPY23P-201ENST00000440136 739 ntBASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 AP005242.2-201ENST00000580065 1175 ntBASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB9Q9Y5E1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB9Q9Y5E1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
PCDHB9Q9Y5E1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDHB9Q9Y5E1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB9Q9Y5E1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 AC141586.3-201ENST00000562166 1838 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms