Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 FSCN1P1-201ENST00000568912 1481 ntBASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 C2orf69P3-201ENST00000565542 1120 ntBASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 AC026271.3-201ENST00000571884 352 ntBASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 AC006011.2-201ENST00000621313 1158 ntBASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FNDC3AQ9Y2H6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
FNDC3AQ9Y2H6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
FNDC3AQ9Y2H6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.39■□□□□ 0.7
FNDC3AQ9Y2H6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FNDC3AQ9Y2H6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 AL445675.2-201ENST00000620291 557 ntBASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FNDC3AQ9Y2H6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 LIN28AP1-201ENST00000429574 405 ntBASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 ATP5G1P1-201ENST00000448724 379 ntBASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 ECEL1P2-202ENST00000465689 757 ntBASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FNDC3AQ9Y2H6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 Z82202.1-201ENST00000623446 1880 ntBASIC19.37■□□□□ 0.69
FNDC3AQ9Y2H6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms