Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 AC008622.2-201ENST00000617006 1229 ntBASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 AC073314.1-201ENST00000568729 2216 ntBASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 NEK4P2-201ENST00000580004 1012 ntBASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SSX2IPQ9Y2D8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
SSX2IPQ9Y2D8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.39■□□□□ 0.86
SSX2IPQ9Y2D8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SSX2IPQ9Y2D8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.39■□□□□ 0.86
SSX2IPQ9Y2D8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SSX2IPQ9Y2D8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 KRT8P11-201ENST00000409686 1436 ntBASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSX2IPQ9Y2D8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 AL023973.1-201ENST00000624619 620 ntBASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.38■□□□□ 0.85
SSX2IPQ9Y2D8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSX2IPQ9Y2D8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms