Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 AP002414.4-201ENST00000589764 1148 ntBASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 PPIH-202ENST00000372549 327 ntTSL 3 BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC29.34■■■□□ 2.29
CDK11AQ9UQ88 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 AL391807.1-203ENST00000604392 2365 ntBASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 AC004870.1-201ENST00000315132 882 ntBASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 AC246785.2-201ENST00000432512 513 ntBASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 FAAHP1-202ENST00000446499 1238 ntBASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 MED17-221ENST00000639724 2317 ntTSL 5 BASIC29.33■■■□□ 2.29
CDK11AQ9UQ88 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 AC092667.1-201ENST00000434301 2586 ntBASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDK11AQ9UQ88 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 KRT8P7-201ENST00000533003 1432 ntBASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDK11AQ9UQ88 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 FDX1P1-201ENST00000449115 551 ntBASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 IL11-204ENST00000590625 1028 ntTSL 2 BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 AL109659.2-201ENST00000606809 1674 ntBASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDK11AQ9UQ88 LBX2-AS1-202ENST00000603175 2083 ntBASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 TSPY22P-201ENST00000427496 604 ntBASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 KRT17P6-201ENST00000453795 1220 ntBASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC29.29■■■□□ 2.28
CDK11AQ9UQ88 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms