Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 KRT8P41-201ENST00000533985 1514 ntBASIC7.8□□□□□ -1.16
MACF1Q9UPN3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 UGT1A2P-201ENST00000454886 866 ntBASIC7.8□□□□□ -1.16
MACF1Q9UPN3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 CEND1P1-201ENST00000451006 455 ntBASIC7.8□□□□□ -1.16
MACF1Q9UPN3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
MACF1Q9UPN3 MIR6787-201ENST00000616675 61 ntBASIC7.8□□□□□ -1.16
MACF1Q9UPN3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 MIR661-201ENST00000384842 89 ntBASIC7.79□□□□□ -1.16
MACF1Q9UPN3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 AC018553.1-201ENST00000616682 1458 ntBASIC7.79□□□□□ -1.16
MACF1Q9UPN3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 LINC01124-201ENST00000409786 2117 ntBASIC7.79□□□□□ -1.16
MACF1Q9UPN3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 AL033527.4-201ENST00000641026 673 ntBASIC7.79□□□□□ -1.16
MACF1Q9UPN3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
MACF1Q9UPN3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 MRPL20P1-201ENST00000400819 433 ntBASIC7.78□□□□□ -1.16
MACF1Q9UPN3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 RN7SL692P-201ENST00000464677 288 ntBASIC7.78□□□□□ -1.16
MACF1Q9UPN3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 GPR182-203ENST00000622922 591 ntBASIC7.78□□□□□ -1.16
MACF1Q9UPN3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms