Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SPASTQ9UBP0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPASTQ9UBP0 AC125437.2-201ENST00000625180 2167 ntBASIC18.89■□□□□ 0.62
SPASTQ9UBP0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 AK4P3-201ENST00000418260 669 ntBASIC18.89■□□□□ 0.61
SPASTQ9UBP0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 CA15P1-201ENST00000481698 905 ntBASIC18.89■□□□□ 0.61
SPASTQ9UBP0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 AC092338.2-201ENST00000568827 1415 ntBASIC18.89■□□□□ 0.61
SPASTQ9UBP0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPASTQ9UBP0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 AL158211.5-201ENST00000623583 2518 ntBASIC18.88■□□□□ 0.61
SPASTQ9UBP0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 LINC01238-205ENST00000567549 1107 ntBASIC18.88■□□□□ 0.61
SPASTQ9UBP0 AL512604.3-201ENST00000569583 964 ntBASIC18.88■□□□□ 0.61
SPASTQ9UBP0 AC087388.1-201ENST00000571370 1112 ntBASIC18.88■□□□□ 0.61
SPASTQ9UBP0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 AL023803.3-201ENST00000615559 522 ntBASIC18.88■□□□□ 0.61
SPASTQ9UBP0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SPASTQ9UBP0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.87■□□□□ 0.61
SPASTQ9UBP0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 KRT8P41-201ENST00000533985 1514 ntBASIC18.87■□□□□ 0.61
SPASTQ9UBP0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 CKBP1-201ENST00000565489 1086 ntBASIC18.87■□□□□ 0.61
SPASTQ9UBP0 AL353719.1-201ENST00000566847 864 ntBASIC18.87■□□□□ 0.61
SPASTQ9UBP0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SPASTQ9UBP0 AC087289.5-201ENST00000586076 3175 ntBASIC18.87■□□□□ 0.61
SPASTQ9UBP0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.86■□□□□ 0.61
SPASTQ9UBP0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.86■□□□□ 0.61
SPASTQ9UBP0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms