Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 AL512625.2-201ENST00000417533 625 ntBASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 GNAS-203ENST00000306120 1878 ntBASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.92■□□□□ 0.94
SPTLC3Q9NUV7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 LSM12P1-201ENST00000411836 588 ntBASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 RARRES2P6-201ENST00000567333 442 ntBASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 AC020763.4-201ENST00000623414 4170 ntBASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTLC3Q9NUV7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 AC134043.2-201ENST00000624206 2238 ntBASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 ZNF815P-204ENST00000434898 1737 ntBASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.9■□□□□ 0.94
SPTLC3Q9NUV7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
SPTLC3Q9NUV7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
SPTLC3Q9NUV7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.89■□□□□ 0.94
SPTLC3Q9NUV7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.89■□□□□ 0.94
SPTLC3Q9NUV7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPTLC3Q9NUV7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 AL162430.1-201ENST00000480705 870 ntBASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms