Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 KRT8P11-201ENST00000409686 1436 ntBASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 AC005332.7-201ENST00000614046 2005 ntBASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SDHAF3Q9NRP4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 AC096733.2-201ENST00000609937 1394 ntBASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 CKBP1-201ENST00000565489 1086 ntBASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 AP005242.2-201ENST00000580065 1175 ntBASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 AC007952.6-201ENST00000573168 2673 ntBASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 AC003957.1-201ENST00000625108 2673 ntBASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SDHAF3Q9NRP4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 AC116562.4-201ENST00000641316 2276 ntBASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SDHAF3Q9NRP4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 TEX21P-204ENST00000641479 1693 ntBASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 MFAP1P1-201ENST00000442257 1255 ntBASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 FITM1-202ENST00000559294 800 ntBASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SDHAF3Q9NRP4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SDHAF3Q9NRP4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms