Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 MIPEPP3-201ENST00000412105 444 ntBASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
PCDHB16Q9NRJ7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 KRT8P8-201ENST00000434750 1448 ntBASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 DUSP5P2-201ENST00000426873 1033 ntBASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 RPS2P52-201ENST00000469610 820 ntBASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 AC083906.2-201ENST00000511578 360 ntBASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 MIR4758-201ENST00000577688 71 ntBASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 AL050303.2-201ENST00000619798 666 ntBASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 AC018470.1-201ENST00000624790 3129 ntBASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB16Q9NRJ7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms