Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 AC005332.1-201ENST00000577698 1310 ntBASIC19.64■□□□□ 0.73
HPS4Q9NQG7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS4Q9NQG7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 KRT18P56-201ENST00000507275 550 ntBASIC19.63■□□□□ 0.73
HPS4Q9NQG7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS4Q9NQG7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 NEK4P2-201ENST00000580004 1012 ntBASIC19.62■□□□□ 0.73
HPS4Q9NQG7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 AC116407.4-201ENST00000623319 1061 ntBASIC19.62■□□□□ 0.73
HPS4Q9NQG7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.62■□□□□ 0.73
HPS4Q9NQG7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 AP000523.1-201ENST00000398242 1049 ntBASIC19.61■□□□□ 0.73
HPS4Q9NQG7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.61■□□□□ 0.73
HPS4Q9NQG7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 GCSHP2-201ENST00000560971 527 ntBASIC19.61■□□□□ 0.73
HPS4Q9NQG7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms