Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 AC093525.10-201ENST00000625130 1569 ntBASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 AC007613.1-201ENST00000572811 2597 ntBASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 Z98044.1-201ENST00000632503 1764 ntBASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 KRASP1-201ENST00000407852 552 ntBASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 KRT18P6-201ENST00000555540 1265 ntBASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NLRC4Q9NPP4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 TSPY23P-201ENST00000440136 739 ntBASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.59■□□□□ 0.89
NLRC4Q9NPP4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 AC239809.2-201ENST00000415381 517 ntBASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.58■□□□□ 0.89
NLRC4Q9NPP4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms