Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 AC011298.2-201ENST00000617989 482 ntBASIC23.97■■□□□ 1.43
CHMP4BQ9H444 AC093503.3-201ENST00000624917 2352 ntBASIC23.97■■□□□ 1.43
CHMP4BQ9H444 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHMP4BQ9H444 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CHMP4BQ9H444 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
CHMP4BQ9H444 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.95■■□□□ 1.42
CHMP4BQ9H444 GCSHP5-201ENST00000443090 522 ntBASIC23.95■■□□□ 1.42
CHMP4BQ9H444 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 MIR6786-201ENST00000616843 113 ntBASIC23.95■■□□□ 1.42
CHMP4BQ9H444 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
CHMP4BQ9H444 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.94■■□□□ 1.42
CHMP4BQ9H444 AC004408.2-201ENST00000623613 2777 ntBASIC23.94■■□□□ 1.42
CHMP4BQ9H444 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 FAM207BP-201ENST00000447172 505 ntBASIC23.94■■□□□ 1.42
CHMP4BQ9H444 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
CHMP4BQ9H444 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 AC012618.2-201ENST00000428058 849 ntBASIC23.93■■□□□ 1.42
CHMP4BQ9H444 AL031598.1-201ENST00000561511 1773 ntBASIC23.93■■□□□ 1.42
CHMP4BQ9H444 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 KRT8P3-201ENST00000519669 1449 ntBASIC23.93■■□□□ 1.42
CHMP4BQ9H444 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.93■■□□□ 1.42
CHMP4BQ9H444 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms