Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 PRKY-204ENST00000533551 1019 ntBASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 AC142381.4-202ENST00000563973 229 ntBASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 C1QBPP2-201ENST00000528754 825 ntBASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.59■□□□□ 0.89
NUCKS1Q9H1E3 AC009113.1-201ENST00000570267 2443 ntBASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 AL359736.2-201ENST00000621992 437 ntBASIC20.58■□□□□ 0.89
NUCKS1Q9H1E3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NUCKS1Q9H1E3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NUCKS1Q9H1E3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
NUCKS1Q9H1E3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NUCKS1Q9H1E3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.58■□□□□ 0.88
NUCKS1Q9H1E3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NUCKS1Q9H1E3 AC026471.1-201ENST00000564629 3026 ntBASIC20.58■□□□□ 0.88
NUCKS1Q9H1E3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NUCKS1Q9H1E3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NUCKS1Q9H1E3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 RPPH1-201ENST00000516869 333 ntBASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 AL160286.2-201ENST00000567150 934 ntBASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 AL023875.1-201ENST00000640777 796 ntBASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUCKS1Q9H1E3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms