Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 RPPH1-201ENST00000516869 333 ntBASIC17.48■□□□□ 0.39
TRIM2Q9C040 C1QBPP2-201ENST00000528754 825 ntBASIC17.48■□□□□ 0.39
TRIM2Q9C040 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 AL138781.2-201ENST00000617896 1843 ntBASIC17.47■□□□□ 0.39
TRIM2Q9C040 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 AC133681.1-201ENST00000465482 601 ntBASIC17.47■□□□□ 0.39
TRIM2Q9C040 RPS2P4-201ENST00000476944 856 ntBASIC17.47■□□□□ 0.39
TRIM2Q9C040 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM2Q9C040 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRIM2Q9C040 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 AC110285.5-201ENST00000611501 352 ntBASIC17.46■□□□□ 0.39
TRIM2Q9C040 FAM197Y4-202ENST00000622692 608 ntBASIC17.46■□□□□ 0.39
TRIM2Q9C040 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM2Q9C040 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRIM2Q9C040 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.46■□□□□ 0.38
TRIM2Q9C040 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM2Q9C040 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms