Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 AC138761.1-201ENST00000584393 385 ntBASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 AC254562.1-201ENST00000417586 456 ntBASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 RPS2P1-201ENST00000434010 821 ntBASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 MTDHP3-201ENST00000594186 672 ntBASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 AC063926.2-201ENST00000623766 1308 ntBASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.96■□□□□ 0.63
LRFN3Q9BTN0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 AC011840.4-201ENST00000578471 627 ntBASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 HLA-J-201ENST00000462773 1622 ntBASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN3Q9BTN0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 AC007967.2-201ENST00000432613 625 ntBASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 AC007274.1-201ENST00000439805 662 ntBASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 AC005829.1-201ENST00000570002 483 ntBASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 MIR3180-5-201ENST00000583743 153 ntBASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 AC121338.2-201ENST00000622535 1744 ntBASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN3Q9BTN0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 AL023284.2-201ENST00000405850 579 ntBASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 AC114341.1-201ENST00000618070 349 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms