Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.83□□□□□ -0.04
TRGV9Q99603 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV9Q99603 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.83□□□□□ -0.04
TRGV9Q99603 PRKY-204ENST00000533551 1019 ntBASIC14.83□□□□□ -0.04
TRGV9Q99603 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.83□□□□□ -0.04
TRGV9Q99603 AL138781.1-201ENST00000566567 1274 ntBASIC14.83□□□□□ -0.04
TRGV9Q99603 AL160286.2-201ENST00000567150 934 ntBASIC14.83□□□□□ -0.04
TRGV9Q99603 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.83□□□□□ -0.04
TRGV9Q99603 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV9Q99603 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV9Q99603 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV9Q99603 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV9Q99603 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.82□□□□□ -0.04
TRGV9Q99603 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRGV9Q99603 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV9Q99603 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.82□□□□□ -0.04
TRGV9Q99603 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV9Q99603 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV9Q99603 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.82□□□□□ -0.04
TRGV9Q99603 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.82□□□□□ -0.04
TRGV9Q99603 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.82□□□□□ -0.04
TRGV9Q99603 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV9Q99603 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV9Q99603 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRGV9Q99603 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV9Q99603 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRGV9Q99603 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRGV9Q99603 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV9Q99603 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRGV9Q99603 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV9Q99603 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRGV9Q99603 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV9Q99603 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.81□□□□□ -0.04
TRGV9Q99603 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.81□□□□□ -0.04
TRGV9Q99603 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.81□□□□□ -0.04
TRGV9Q99603 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRGV9Q99603 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRGV9Q99603 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.81□□□□□ -0.04
TRGV9Q99603 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRGV9Q99603 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRGV9Q99603 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.81□□□□□ -0.04
TRGV9Q99603 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.81□□□□□ -0.04
TRGV9Q99603 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV9Q99603 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms