Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PHOX2BQ99453 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 TOB2P1-201ENST00000469761 992 ntBASIC19.19■□□□□ 0.66
PHOX2BQ99453 AL390719.2-201ENST00000606993 987 ntBASIC19.19■□□□□ 0.66
PHOX2BQ99453 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
PHOX2BQ99453 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.19■□□□□ 0.66
PHOX2BQ99453 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHOX2BQ99453 TFP1-202ENST00000475455 1573 ntBASIC19.19■□□□□ 0.66
PHOX2BQ99453 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.18■□□□□ 0.66
PHOX2BQ99453 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.18■□□□□ 0.66
PHOX2BQ99453 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.18■□□□□ 0.66
PHOX2BQ99453 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 RPS8P6-201ENST00000426177 609 ntBASIC19.18■□□□□ 0.66
PHOX2BQ99453 DRAXINP1-201ENST00000437611 948 ntBASIC19.18■□□□□ 0.66
PHOX2BQ99453 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.18■□□□□ 0.66
PHOX2BQ99453 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PHOX2BQ99453 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.18■□□□□ 0.66
PHOX2BQ99453 MIR2861-201ENST00000636310 90 ntBASIC19.18■□□□□ 0.66
PHOX2BQ99453 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.18■□□□□ 0.66
PHOX2BQ99453 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.18■□□□□ 0.66
PHOX2BQ99453 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.18■□□□□ 0.66
PHOX2BQ99453 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHOX2BQ99453 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.18■□□□□ 0.66
PHOX2BQ99453 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.18■□□□□ 0.66
PHOX2BQ99453 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 AP001160.2-201ENST00000596071 487 ntBASIC19.17■□□□□ 0.66
PHOX2BQ99453 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.17■□□□□ 0.66
PHOX2BQ99453 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHOX2BQ99453 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.16■□□□□ 0.66
PHOX2BQ99453 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.16■□□□□ 0.66
PHOX2BQ99453 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHOX2BQ99453 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHOX2BQ99453 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.16■□□□□ 0.66
PHOX2BQ99453 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.16■□□□□ 0.66
PHOX2BQ99453 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.16■□□□□ 0.66
PHOX2BQ99453 AC244517.3-201ENST00000616254 1235 ntBASIC19.16■□□□□ 0.66
PHOX2BQ99453 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.16■□□□□ 0.66
PHOX2BQ99453 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.16■□□□□ 0.66
PHOX2BQ99453 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
PHOX2BQ99453 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHOX2BQ99453 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHOX2BQ99453 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHOX2BQ99453 AL162741.1-201ENST00000565563 1558 ntBASIC19.15■□□□□ 0.66
PHOX2BQ99453 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHOX2BQ99453 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHOX2BQ99453 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PHOX2BQ99453 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHOX2BQ99453 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PHOX2BQ99453 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHOX2BQ99453 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PHOX2BQ99453 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms