Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RFPL4AP1-201ENST00000530883 850 ntBASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 KRT18P28-201ENST00000453838 1332 ntBASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3BQ96NU0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNTNAP3BQ96NU0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.14■□□□□ 0.5
CNTNAP3BQ96NU0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.14■□□□□ 0.5
CNTNAP3BQ96NU0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CNTNAP3BQ96NU0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNTNAP3BQ96NU0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNTNAP3BQ96NU0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CNTNAP3BQ96NU0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CNTNAP3BQ96NU0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 FAM99A-202ENST00000538190 1989 ntBASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 AF186996.4-201ENST00000467186 377 ntBASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 Z85996.1-201ENST00000494644 937 ntBASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 LINC00167-201ENST00000530583 1419 ntBASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3BQ96NU0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CNTNAP3BQ96NU0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 METTL21AP1-201ENST00000438852 635 ntBASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 DNAJB3-202ENST00000449667 1266 ntBASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3BQ96NU0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 AC139887.3-201ENST00000568585 713 ntBASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms