Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCLT1Q96NL6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCLT1Q96NL6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCLT1Q96NL6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 HMGA1P5-201ENST00000412453 271 ntBASIC21.15■□□□□ 0.98
SCLT1Q96NL6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 CKBP1-201ENST00000565489 1086 ntBASIC21.15■□□□□ 0.98
SCLT1Q96NL6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCLT1Q96NL6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCLT1Q96NL6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCLT1Q96NL6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCLT1Q96NL6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
SCLT1Q96NL6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SCLT1Q96NL6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCLT1Q96NL6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SCLT1Q96NL6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 AL445228.2-201ENST00000605589 952 ntBASIC21.14■□□□□ 0.97
SCLT1Q96NL6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 AL590326.2-201ENST00000625139 305 ntBASIC21.14■□□□□ 0.97
SCLT1Q96NL6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 ZNF815P-204ENST00000434898 1737 ntBASIC21.14■□□□□ 0.97
SCLT1Q96NL6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCLT1Q96NL6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 AC073508.3-201ENST00000619697 1419 ntBASIC21.13■□□□□ 0.97
SCLT1Q96NL6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 ARMC10P1-201ENST00000313754 855 ntBASIC21.13■□□□□ 0.97
SCLT1Q96NL6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.13■□□□□ 0.97
SCLT1Q96NL6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCLT1Q96NL6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 AC007663.1-201ENST00000438948 1240 ntBASIC21.12■□□□□ 0.97
SCLT1Q96NL6 TSPY17P-201ENST00000450329 467 ntBASIC21.12■□□□□ 0.97
SCLT1Q96NL6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.12■□□□□ 0.97
SCLT1Q96NL6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms