Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 AC106820.2-201ENST00000563775 3264 ntBASIC16.35■□□□□ 0.21
CMTM3Q96MX0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMTM3Q96MX0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.34■□□□□ 0.21
CMTM3Q96MX0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 BCL2-203ENST00000589955 5011 ntBASIC16.34■□□□□ 0.21
CMTM3Q96MX0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 KRT18P11-201ENST00000435214 1283 ntBASIC16.34■□□□□ 0.21
CMTM3Q96MX0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 AC005837.3-201ENST00000612163 286 ntBASIC16.34■□□□□ 0.21
CMTM3Q96MX0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMTM3Q96MX0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.33■□□□□ 0.21
CMTM3Q96MX0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CMTM3Q96MX0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CMTM3Q96MX0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CMTM3Q96MX0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.33■□□□□ 0.21
CMTM3Q96MX0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CMTM3Q96MX0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 AC073210.2-201ENST00000430369 194 ntBASIC16.33■□□□□ 0.2
CMTM3Q96MX0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 AC068338.2-201ENST00000563278 1430 ntBASIC16.33■□□□□ 0.2
CMTM3Q96MX0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.33■□□□□ 0.2
CMTM3Q96MX0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 AC134043.2-201ENST00000624206 2238 ntBASIC16.33■□□□□ 0.2
CMTM3Q96MX0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMTM3Q96MX0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms