Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.56■□□□□ 0.72
C9orf72Q96LT7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.56■□□□□ 0.72
C9orf72Q96LT7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.56■□□□□ 0.72
C9orf72Q96LT7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.56■□□□□ 0.72
C9orf72Q96LT7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.56■□□□□ 0.72
C9orf72Q96LT7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 AP006294.2-201ENST00000641667 209 ntBASIC19.55■□□□□ 0.72
C9orf72Q96LT7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
C9orf72Q96LT7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf72Q96LT7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 AL133373.2-201ENST00000623187 2828 ntBASIC19.53■□□□□ 0.72
C9orf72Q96LT7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.53■□□□□ 0.72
C9orf72Q96LT7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.53■□□□□ 0.72
C9orf72Q96LT7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 KRT8P8-201ENST00000434750 1448 ntBASIC19.52■□□□□ 0.72
C9orf72Q96LT7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf72Q96LT7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms