Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 FSCN1P1-201ENST00000568912 1481 ntBASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 AC098590.1-201ENST00000468126 897 ntBASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 B3GAT3P1-201ENST00000471720 806 ntBASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 CKBP1-201ENST00000565489 1086 ntBASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM5Q96HC4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 MESTP1-201ENST00000404287 994 ntBASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 KRT8P32-201ENST00000512863 1461 ntBASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 HEIH-201ENST00000623091 1652 ntBASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM5Q96HC4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 FAM207BP-201ENST00000447172 505 ntBASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 AC116562.2-201ENST00000507042 360 ntBASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 CD177P1-201ENST00000606252 935 ntBASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 AP000692.2-201ENST00000608391 879 ntBASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.55■□□□□ 0.56
PDLIM5Q96HC4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.54■□□□□ 0.56
PDLIM5Q96HC4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms