Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTP4Q96DX8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTP4Q96DX8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.39■□□□□ 0.7
RTP4Q96DX8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RTP4Q96DX8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RTP4Q96DX8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RTP4Q96DX8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RTP4Q96DX8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RTP4Q96DX8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RTP4Q96DX8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.39■□□□□ 0.69
RTP4Q96DX8 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.39■□□□□ 0.69
RTP4Q96DX8 PRSS44-201ENST00000515154 1146 ntBASIC19.39■□□□□ 0.69
RTP4Q96DX8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RTP4Q96DX8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.39■□□□□ 0.69
RTP4Q96DX8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.39■□□□□ 0.69
RTP4Q96DX8 AC131212.4-201ENST00000623606 975 ntBASIC19.39■□□□□ 0.69
RTP4Q96DX8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RTP4Q96DX8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.39■□□□□ 0.69
RTP4Q96DX8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.39■□□□□ 0.69
RTP4Q96DX8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RTP4Q96DX8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.39■□□□□ 0.69
RTP4Q96DX8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTP4Q96DX8 AC104581.1-202ENST00000635932 2618 ntBASIC19.38■□□□□ 0.69
RTP4Q96DX8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.38■□□□□ 0.69
RTP4Q96DX8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 AC005082.1-201ENST00000413042 2259 ntBASIC19.38■□□□□ 0.69
RTP4Q96DX8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.38■□□□□ 0.69
RTP4Q96DX8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RTP4Q96DX8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 RCC2P6-201ENST00000526625 1557 ntBASIC19.38■□□□□ 0.69
RTP4Q96DX8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
RTP4Q96DX8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.38■□□□□ 0.69
RTP4Q96DX8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 HEIH-201ENST00000623091 1652 ntBASIC19.38■□□□□ 0.69
RTP4Q96DX8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTP4Q96DX8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RTP4Q96DX8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RTP4Q96DX8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.37■□□□□ 0.69
RTP4Q96DX8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.37■□□□□ 0.69
RTP4Q96DX8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 KSR1P1-201ENST00000446298 240 ntBASIC19.37■□□□□ 0.69
RTP4Q96DX8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.37■□□□□ 0.69
RTP4Q96DX8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.37■□□□□ 0.69
RTP4Q96DX8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.37■□□□□ 0.69
RTP4Q96DX8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.37■□□□□ 0.69
RTP4Q96DX8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTP4Q96DX8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.37■□□□□ 0.69
RTP4Q96DX8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RTP4Q96DX8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTP4Q96DX8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTP4Q96DX8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTP4Q96DX8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.36■□□□□ 0.69
RTP4Q96DX8 HTR7P1-201ENST00000538670 1336 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms