Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 RASA4CP-201ENST00000424092 1398 ntBASIC16.76■□□□□ 0.27
AP3S1Q92572 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
AP3S1Q92572 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.75■□□□□ 0.27
AP3S1Q92572 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 AC018553.1-201ENST00000616682 1458 ntBASIC16.75■□□□□ 0.27
AP3S1Q92572 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
AP3S1Q92572 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.75■□□□□ 0.27
AP3S1Q92572 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3S1Q92572 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S1Q92572 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
AP3S1Q92572 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP3S1Q92572 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3S1Q92572 AC012313.1-201ENST00000593393 3059 ntBASIC16.74■□□□□ 0.27
AP3S1Q92572 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3S1Q92572 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.74■□□□□ 0.27
AP3S1Q92572 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP3S1Q92572 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP3S1Q92572 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
AP3S1Q92572 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP3S1Q92572 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
AP3S1Q92572 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.74■□□□□ 0.27
AP3S1Q92572 AL356441.2-201ENST00000443009 864 ntBASIC16.74■□□□□ 0.27
AP3S1Q92572 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.74■□□□□ 0.27
AP3S1Q92572 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3S1Q92572 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.74■□□□□ 0.27
AP3S1Q92572 MFSD11-216ENST00000590393 1141 ntBASIC16.74■□□□□ 0.27
AP3S1Q92572 LINC00896-202ENST00000609602 2128 ntBASIC16.74■□□□□ 0.27
AP3S1Q92572 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
AP3S1Q92572 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.74■□□□□ 0.27
AP3S1Q92572 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP3S1Q92572 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
AP3S1Q92572 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3S1Q92572 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP3S1Q92572 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S1Q92572 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
AP3S1Q92572 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
AP3S1Q92572 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3S1Q92572 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3S1Q92572 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
AP3S1Q92572 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.73■□□□□ 0.27
AP3S1Q92572 AC023632.3-201ENST00000521633 145 ntBASIC16.73■□□□□ 0.27
AP3S1Q92572 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP3S1Q92572 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3S1Q92572 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP3S1Q92572 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP3S1Q92572 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.73■□□□□ 0.27
AP3S1Q92572 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.73■□□□□ 0.27
AP3S1Q92572 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S1Q92572 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
AP3S1Q92572 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S1Q92572 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms