Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 MAX-217ENST00000557277 728 ntTSL 3 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 AC124283.5-201ENST00000624661 1809 ntBASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 RNA5SP413-201ENST00000516373 109 ntBASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 AC008687.6-201ENST00000596318 630 ntBASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 AC120498.8-201ENST00000614275 531 ntBASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN4IP1Q8WWV3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 FP475955.4-201ENST00000623131 1990 ntBASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 UNC93B4-201ENST00000505679 747 ntBASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 UNC93B5-201ENST00000530315 699 ntBASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 AL121906.2-201ENST00000621597 723 ntBASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN4IP1Q8WWV3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 TFP1-202ENST00000475455 1573 ntBASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms