Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 TSPY23P-201ENST00000440136 739 ntBASIC19.95■□□□□ 0.78
RNF139Q8WU17 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.95■□□□□ 0.78
RNF139Q8WU17 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF139Q8WU17 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 LINC01568-207ENST00000641790 1380 ntBASIC19.95■□□□□ 0.78
RNF139Q8WU17 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF139Q8WU17 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 AC010947.1-201ENST00000623454 693 ntBASIC19.94■□□□□ 0.78
RNF139Q8WU17 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF139Q8WU17 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF139Q8WU17 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF139Q8WU17 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.93■□□□□ 0.78
RNF139Q8WU17 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF139Q8WU17 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF139Q8WU17 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.93■□□□□ 0.78
RNF139Q8WU17 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF139Q8WU17 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF139Q8WU17 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF139Q8WU17 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF139Q8WU17 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RNF139Q8WU17 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF139Q8WU17 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
RNF139Q8WU17 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
RNF139Q8WU17 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RNF139Q8WU17 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF139Q8WU17 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF139Q8WU17 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF139Q8WU17 EGLN1P1-201ENST00000531623 762 ntBASIC19.92■□□□□ 0.78
RNF139Q8WU17 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF139Q8WU17 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF139Q8WU17 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF139Q8WU17 KRT18P22-201ENST00000402024 1347 ntBASIC19.92■□□□□ 0.78
RNF139Q8WU17 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 AC141586.3-201ENST00000562166 1838 ntBASIC19.92■□□□□ 0.78
RNF139Q8WU17 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF139Q8WU17 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF139Q8WU17 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF139Q8WU17 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms