Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 SPDYE15P-201ENST00000424157 909 ntBASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF3Q8TEJ3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 AC112907.2-201ENST00000448639 330 ntBASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 AC091076.1-201ENST00000610741 619 ntBASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 HYMAI.1-201ENST00000620949 238 ntBASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 AL121956.5-201ENST00000625261 221 ntBASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SH3RF3Q8TEJ3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 UPK3BP1-201ENST00000428678 509 ntBASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 MCCD1P1-208ENST00000445732 328 ntBASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SH3RF3Q8TEJ3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 STARP1-201ENST00000397973 869 ntBASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 PCED1CP-201ENST00000419887 785 ntBASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 AC083849.1-201ENST00000615227 514 ntBASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 IRX1P1-201ENST00000438849 1838 ntBASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF3Q8TEJ3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms