Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 TSPY21P-201ENST00000433481 731 ntBASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 C1QBPP2-201ENST00000528754 825 ntBASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 AC006333.2-201ENST00000607957 2099 ntBASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 FEM1AP3-201ENST00000403722 1741 ntBASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP1Q8TDR0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAF3IP1Q8TDR0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 FAM201B-201ENST00000458407 597 ntBASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP1Q8TDR0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms